| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065882
Identifier: 78065882
GI number: 78065882
Start: 1369971
End: 1370738
Strand: Direct
Name: 78065882
Synonym: Bcep18194_A4411
Alternate gene names: NA
Gene position: 1369971-1370738 (Clockwise)
Preceding gene: 78065881
Following gene: 78065883
Centisome position: 37.09
GC content: 70.05
Gene sequence:
>768_bases ATGCTGCAGATGCTCGAAAAAACTGTCGCCCACAACGGGCTCGTCGCGTCGTTCGCGCTGGTCGGCCTGATCATGTGGCT GTCGTCGATCGCGTCGCGCAAGCTCACGTTCGGCCGTGTGCACGGCTCCGCGATCGCGATCGTGATCGGCCTCGCGCTGG CGTACGTCGGCGGCGCCTTCACCGGCGGCGAGAAGGGGATCGCCGACGTGCCGCTGTTCGCGGGCGTCGGCCTGATGGGC GGCGCGATGCTGCGCGATTTCGCGATCGTCGCGACCGCGTTCGAAGTACAGCCGACCGAGGCGCGCAAGGCCGGGCTCGT CGGCGTCGTGTCGCTGCTGCTCGGCACCGTGCTGCCGTTCATCGTCGGTGCGTGCATCGCGCGCGCGTTCGGCTATACCG ACGCGGTCAGCATGACGACCATCGGCGCGGGCGCCGTCACCTACATCGTCGGCCCGGTCACGGGCGCGGCGATCGGCGCA AGCTCCGACGTGATCGCGCTCAGCATCGCGACCGGGCTCGTCAAGGCGATCATCGTGATGGTCGGCACGCCGGTTGCGGC CAACTTCATGGGCCTGAAGACGCCGCGTTCCGCGATGATTTTCGGCGGCCTGGCCGGCACCGTCAGCGGCGTGAGCGCGG GGCTCGCCGCGACCGACCGCCGGCTCGTCCCGTACGGTGCGCTCGTCGCGACGTTCCATACGGGCGTCGGCTGTCTGCTC GGCCCGTCGGTGCTGTTCTTCACGACGCGCGCGCTGGTCGGCGCCTAG
Upstream 100 bases:
>100_bases CGATCTGCGCATGCTGCATCGCGGTACTCGTGCGCACCGGGCGCGACGACACGGCCTTCGCGGGCGTGCCGCAATTCGAA GAACAGTGACGGAGGCCGCC
Downstream 100 bases:
>100_bases GCCCGGACGATGGGCGGCCCGAGTGCGGGCCGCATCCATCGCCGCGTCCTCTGAGTCGCATTCGTCAACATCATCAATCG GCGGCGGCGCCAGGCTTAGA
Product: malonate/sodium symporter MadM subunit
Products: NA
Alternate protein names: Malonate/Sodium Symporter MadM Subunit; Malonate Transporter; Malonate Transporter Subunit MadM; MalonateSodium Symporter Subunit MadM; Malonate Transporter-Like Membrane Protein; Facilitator Superfamily Transporter; Malonate Transporter M Subunit; Signal Transduction Histidine Kinase LytS
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLALAYVGGAFTGGEKGIADVPLFAGVGLMG GAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPFIVGACIARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL GPSVLFFTTRALVGA
Sequences:
>Translated_255_residues MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLALAYVGGAFTGGEKGIADVPLFAGVGLMG GAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPFIVGACIARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL GPSVLFFTTRALVGA >Mature_255_residues MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLALAYVGGAFTGGEKGIADVPLFAGVGLMG GAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPFIVGACIARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL GPSVLFFTTRALVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25458; Mature: 25458
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLALAYVGGAF CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCC TGGEKGIADVPLFAGVGLMGGAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH IVGACIARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALSIATGLVKAIIVM HHHHHHHHHHCCCCHHHHHHCCCCHHHHEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHH VGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL HCCCHHHHHHCCCCCCHHHEECCHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHCCHHHH GPSVLFFTTRALVGA CCHHHHHHHHHHHCC >Mature Secondary Structure MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLALAYVGGAF CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCC TGGEKGIADVPLFAGVGLMGGAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH IVGACIARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALSIATGLVKAIIVM HHHHHHHHHHCCCCHHHHHHCCCCHHHHEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHH VGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL HCCCHHHHHHCCCCCCHHHEECCHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHCCHHHH GPSVLFFTTRALVGA CCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA