| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yoaE [H]
Identifier: 78065874
GI number: 78065874
Start: 1364573
End: 1365364
Strand: Direct
Name: yoaE [H]
Synonym: Bcep18194_A4403
Alternate gene names: 78065874
Gene position: 1364573-1365364 (Clockwise)
Preceding gene: 78065871
Following gene: 78065875
Centisome position: 36.94
GC content: 64.27
Gene sequence:
>792_bases ATGATCTGGCTTTCCACTTTCGTATCGGCCCATTTCATGGACTACCTGCTGACGCTTGCCGTTGACCCCGCCGTCTGGGC TGCGCTTCTGACGCTCGTCGTGATGGAAGTCGTGCTCGGCATCGACAACCTGATCTTCATCTCGATCCTCAGCAACAAGC TGCCCGAAGCGCAGCGTGCCCGCACGCAGCGCCTCGGCATCGCGCTCGCGCTGGTGATGCGCCTCGCGCTGCTCGGCAGC GTCGCGTGGATCGCGAGCCTCACCGAACCGGTGTTCACGCTGTTCGACCATGCGTTCTCGTGGCGCGACCTGATCCTGCT GTCGGGCGGCCTGTTCCTCGTCTGGAAGGCGACCACCGAGATCCATCACCATGTGTCGCGCGACGGTGAAGGCGCGGGCG GTTCGGGCGGCGCGGTCGGCCTGACGGTGTGGGCCGCGATCGGCCAGATCGTGATGCTCGACATCGTGTTCTCGATCGAC AGCATCGTGACCGCGATCGGCATGACCGAACACGTGCCGATCATGTTCGTCGCGGTGATCGTCGCCGTCGCCGTGATGCT GTTCGCTGCACAGCCGCTCGCACGCTTCATCGACCGCAACCCGACCATCGTGATGCTCGCGCTGTCGTTCCTGGTCGTGA TCGGCATGACGCTGATCGCCGAAGGGTTCGGCTCGCATGTGCCGAAGGGCTACATCTACGCGGCAATGGCGTTCTCGGCT TTCGTCGAAGGCATGAACATGCTGGCGCGGCGCGCGAAGTCGAAGCGCTCGGCACCGACGGAAGGCCACTGA
Upstream 100 bases:
>100_bases AGTAGTACAGATGTCGGAAATTGAGCATCGGATCGTAATTTCGGAAAAACCGAACCAAAAGTCAGATTCTCTCTGATTTT TCCGAAGTCCGGGGCGGCAT
Downstream 100 bases:
>100_bases GCCACCGCGCGTGACACGGCTGCTGCGGTGGCCGGCGTCACGCGCCTCATATGGAATCCAGACGAAATTCGCACGGAAAG GAGAAGCGCGATGAAATGCC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MIWLSTFVSAHFMDYLLTLAVDPAVWAALLTLVVMEVVLGIDNLIFISILSNKLPEAQRARTQRLGIALALVMRLALLGS VAWIASLTEPVFTLFDHAFSWRDLILLSGGLFLVWKATTEIHHHVSRDGEGAGGSGGAVGLTVWAAIGQIVMLDIVFSID SIVTAIGMTEHVPIMFVAVIVAVAVMLFAAQPLARFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSA FVEGMNMLARRAKSKRSAPTEGH
Sequences:
>Translated_263_residues MIWLSTFVSAHFMDYLLTLAVDPAVWAALLTLVVMEVVLGIDNLIFISILSNKLPEAQRARTQRLGIALALVMRLALLGS VAWIASLTEPVFTLFDHAFSWRDLILLSGGLFLVWKATTEIHHHVSRDGEGAGGSGGAVGLTVWAAIGQIVMLDIVFSID SIVTAIGMTEHVPIMFVAVIVAVAVMLFAAQPLARFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSA FVEGMNMLARRAKSKRSAPTEGH >Mature_263_residues MIWLSTFVSAHFMDYLLTLAVDPAVWAALLTLVVMEVVLGIDNLIFISILSNKLPEAQRARTQRLGIALALVMRLALLGS VAWIASLTEPVFTLFDHAFSWRDLILLSGGLFLVWKATTEIHHHVSRDGEGAGGSGGAVGLTVWAAIGQIVMLDIVFSID SIVTAIGMTEHVPIMFVAVIVAVAVMLFAAQPLARFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSA FVEGMNMLARRAKSKRSAPTEGH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=240, Percent_Identity=53.3333333333333, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI1789197, Length=232, Percent_Identity=52.5862068965517, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=49.1228070175439, Blast_Score=228, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 28391; Mature: 28391
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWLSTFVSAHFMDYLLTLAVDPAVWAALLTLVVMEVVLGIDNLIFISILSNKLPEAQRA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH RTQRLGIALALVMRLALLGSVAWIASLTEPVFTLFDHAFSWRDLILLSGGLFLVWKATTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHH IHHHVSRDGEGAGGSGGAVGLTVWAAIGQIVMLDIVFSIDSIVTAIGMTEHVPIMFVAVI HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VAVAVMLFAAQPLARFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FVEGMNMLARRAKSKRSAPTEGH HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIWLSTFVSAHFMDYLLTLAVDPAVWAALLTLVVMEVVLGIDNLIFISILSNKLPEAQRA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH RTQRLGIALALVMRLALLGSVAWIASLTEPVFTLFDHAFSWRDLILLSGGLFLVWKATTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHH IHHHVSRDGEGAGGSGGAVGLTVWAAIGQIVMLDIVFSIDSIVTAIGMTEHVPIMFVAVI HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VAVAVMLFAAQPLARFIDRNPTIVMLALSFLVVIGMTLIAEGFGSHVPKGYIYAAMAFSA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FVEGMNMLARRAKSKRSAPTEGH HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]