Click here to switch to the map view.

The map label for this gene is omp32 [H]

Identifier: 78065855

GI number: 78065855

Start: 1341201

End: 1342271

Strand: Direct

Name: omp32 [H]

Synonym: Bcep18194_A4384

Alternate gene names: 78065855

Gene position: 1341201-1342271 (Clockwise)

Preceding gene: 78065854

Following gene: 78065859

Centisome position: 36.31

GC content: 66.67

Gene sequence:

>1071_bases
ATGACTAAACAAATGACGGCCCGCGGGAGCGATTCCCGGGCGTGGATGGCGCACGCCGGTCTTCGCGTGACGGTCGCGGT
GGCGTGCGTCGCTGGACCGGGCGCCGCATTCGCGCAGGACGGCGTCACGCTGTACGGCGTGATCGACGAATTCGCGCAGT
ACGTGAATACGGGCAACGGCTATACGGCGGCGATCAATTCGGGTGGCCAGTGGGGCAGCCGGTTCGGGCTGAAGGGCGGC
GAGGATATCGGCGGCGGGCAGAAGATCGAGTTCGCGCTGGAGAACGGCTTCAACCCGAACGACGGTTCGCTGGCGAGTTC
GGGCAGCCTGTTCAACCGGCAGGCATGGGTCGGCATCGCGGGGCAGTGGGGCAAGGTGCGCGCGGGCCGCCAGAATTCGC
CGCTGTTCAACGACCAGGGCGGACAGGATGCGTTCGGCGGCGTCACGCAGGCGTCCGGCATGGACAACCTGACCGTGTTC
GCGTTCCGCACCAGCAATACGCTGTCGTACCAGAGCCCGGAGATCGCGGGCTTCCAGGGCGGGCTGTACTTCGGGTTCGG
CGATGCGGGCGGCGTGCGCTCGGCAGGCTCCAGCCAGCAGTTCGACCTGACCTACGAACACGGGCCGTTCGGTGCGTTCG
TCGCGGGCCAGTGGCTGAAGAACGCGACGGCGACCACCACCGATCGCACGATCATGGCCGGCGCGTCGTACGAGATCGGC
AAGGCCACCGTGTACGGCGGCTTCTCCGCGGTGAAGTGGGCCGATCTCGGCATCGATTCGCGCGTGTACGGGCTGTCGGT
CAAATACCAGTTCAATCCGGCGAACTACGTGGCGCTCGGCTACGCGTATCTGCACGACCAGTCGTCGCAGGGCAACCATG
CGGACCAGCTCGGGCTGATGTACGAGTACGACCTGTCGAAGCGCACGAGCTTCTACGGCGCGCTGTCGTACCTGCGCAAC
CGCAACCAGGCCGGCTATACGCTCGCCGGTGCGGCGAACCCCGGCCTGCCGCTCGCGTATCCGGGTGCGAATGCACGCGG
TGTGCAGCTGGGTATCGTTCACCGGTTCTGA

Upstream 100 bases:

>100_bases
CTGCCTGCGCCGGGCTCCTCCCCACGTTTCCTTTCCTGCGATGCCGGTGCGGCGCGACTGCCGCGCACGGTGTCGTTTCA
TTCTCTGACCATTGAATAGT

Downstream 100 bases:

>100_bases
AGGATGTGTGGTGCCGCGGTCACGCCGGGTCAGCGGACGGCATGACCGCGGCACGCATCGCGACACGCGCGCGTCGCCAT
CGTTCGGACGCGCGCGTGTC

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTKQMTARGSDSRAWMAHAGLRVTVAVACVAGPGAAFAQDGVTLYGVIDEFAQYVNTGNGYTAAINSGGQWGSRFGLKGG
EDIGGGQKIEFALENGFNPNDGSLASSGSLFNRQAWVGIAGQWGKVRAGRQNSPLFNDQGGQDAFGGVTQASGMDNLTVF
AFRTSNTLSYQSPEIAGFQGGLYFGFGDAGGVRSAGSSQQFDLTYEHGPFGAFVAGQWLKNATATTTDRTIMAGASYEIG
KATVYGGFSAVKWADLGIDSRVYGLSVKYQFNPANYVALGYAYLHDQSSQGNHADQLGLMYEYDLSKRTSFYGALSYLRN
RNQAGYTLAGAANPGLPLAYPGANARGVQLGIVHRF

Sequences:

>Translated_356_residues
MTKQMTARGSDSRAWMAHAGLRVTVAVACVAGPGAAFAQDGVTLYGVIDEFAQYVNTGNGYTAAINSGGQWGSRFGLKGG
EDIGGGQKIEFALENGFNPNDGSLASSGSLFNRQAWVGIAGQWGKVRAGRQNSPLFNDQGGQDAFGGVTQASGMDNLTVF
AFRTSNTLSYQSPEIAGFQGGLYFGFGDAGGVRSAGSSQQFDLTYEHGPFGAFVAGQWLKNATATTTDRTIMAGASYEIG
KATVYGGFSAVKWADLGIDSRVYGLSVKYQFNPANYVALGYAYLHDQSSQGNHADQLGLMYEYDLSKRTSFYGALSYLRN
RNQAGYTLAGAANPGLPLAYPGANARGVQLGIVHRF
>Mature_355_residues
TKQMTARGSDSRAWMAHAGLRVTVAVACVAGPGAAFAQDGVTLYGVIDEFAQYVNTGNGYTAAINSGGQWGSRFGLKGGE
DIGGGQKIEFALENGFNPNDGSLASSGSLFNRQAWVGIAGQWGKVRAGRQNSPLFNDQGGQDAFGGVTQASGMDNLTVFA
FRTSNTLSYQSPEIAGFQGGLYFGFGDAGGVRSAGSSQQFDLTYEHGPFGAFVAGQWLKNATATTTDRTIMAGASYEIGK
ATVYGGFSAVKWADLGIDSRVYGLSVKYQFNPANYVALGYAYLHDQSSQGNHADQLGLMYEYDLSKRTSFYGALSYLRNR
NQAGYTLAGAANPGLPLAYPGANARGVQLGIVHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37578; Mature: 37447

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQMTARGSDSRAWMAHAGLRVTVAVACVAGPGAAFAQDGVTLYGVIDEFAQYVNTGNG
CCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCHHHHCCEEEEEHHHHHHHHHHCCCC
YTAAINSGGQWGSRFGLKGGEDIGGGQKIEFALENGFNPNDGSLASSGSLFNRQAWVGIA
EEEEECCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
GQWGKVRAGRQNSPLFNDQGGQDAFGGVTQASGMDNLTVFAFRTSNTLSYQSPEIAGFQG
CCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC
GLYFGFGDAGGVRSAGSSQQFDLTYEHGPFGAFVAGQWLKNATATTTDRTIMAGASYEIG
CEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCC
KATVYGGFSAVKWADLGIDSRVYGLSVKYQFNPANYVALGYAYLHDQSSQGNHADQLGLM
CEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCHHHCCEE
YEYDLSKRTSFYGALSYLRNRNQAGYTLAGAANPGLPLAYPGANARGVQLGIVHRF
EEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
TKQMTARGSDSRAWMAHAGLRVTVAVACVAGPGAAFAQDGVTLYGVIDEFAQYVNTGNG
CCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCHHHHCCEEEEEHHHHHHHHHHCCCC
YTAAINSGGQWGSRFGLKGGEDIGGGQKIEFALENGFNPNDGSLASSGSLFNRQAWVGIA
EEEEECCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
GQWGKVRAGRQNSPLFNDQGGQDAFGGVTQASGMDNLTVFAFRTSNTLSYQSPEIAGFQG
CCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC
GLYFGFGDAGGVRSAGSSQQFDLTYEHGPFGAFVAGQWLKNATATTTDRTIMAGASYEIG
CEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCC
KATVYGGFSAVKWADLGIDSRVYGLSVKYQFNPANYVALGYAYLHDQSSQGNHADQLGLM
CEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCHHHCCEE
YEYDLSKRTSFYGALSYLRNRNQAGYTLAGAANPGLPLAYPGANARGVQLGIVHRF
EEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]