| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is otsA [H]
Identifier: 78065742
GI number: 78065742
Start: 1202501
End: 1203880
Strand: Direct
Name: otsA [H]
Synonym: Bcep18194_A4270
Alternate gene names: 78065742
Gene position: 1202501-1203880 (Clockwise)
Preceding gene: 78065741
Following gene: 78065744
Centisome position: 32.55
GC content: 66.23
Gene sequence:
>1380_bases ATGAGTCGCCTCATCATTGTTTCAAACCGCGTTGCGCCGATTTCGGAAGGCGAACCGGCGGCGGGTGGTCTCGCGATCGG CGTCTACGATGCGCTGAAGGAGACGGGCGGCATGTGGTTCGGCTGGAGCGGCGAGGTCGTCGCGTCCGGCGCACCGCAAA TTCGCGTCGAGGAGCACGGGCCGGTCACGTTCGCGACCATCGGCCTGTCGCGGCGCGACTACGACCAGTATTACCGCGGC TTCTCGAACGCGACGCTGTGGCCCGCGTTTCATTACCGCACCGACCTGATCCAGTACGACCGTCACGAGTTCGAAGGCTA CAGCCGCGTGAACGTGTGGCTTGCCCAGCAGCTCGTGCCGCTGCTGCAGGACGACGACGTGATCTGGGTGCACGACTATC ACCTGATCCCGTTCGCGCGCGCACTGCGCGCGGCCGGCGTGAAGAACCGCATCGGCTTCTTCCTGCATATCCCGTTTCCG GCTGCACAGGTGCTCGTCAACGTGCCGCCGCATCGCGATCTCGTCGAGTCACTGTGCGCGTTCGACCTGATCGGTTTCCA GACCGAACCCGACCTGCGCGCGTTCTGCGACTACGTCGAATCCGAAGCGGACGGCGTGATCGAGCGCGACGGCCACCTGG CGACGGTGCGCGCATTCGGCCGGACGCTGCGCGCGGCCGCCTATCCGATCGGCGTGCATCCGGACGAGATCGCGTCGCTC GCGCAGGCCGGCGAGCACGGCAAGGCGGTGCGCACGCTCGCGATCTCGCTGCGCGGCCGCAAGCTGATCATGAGCGTCGA CCGGCTCGATTATTCGAAGGGGCTCGTCGAGCGCTTCCGTGCGTTCGAGAAGCTGCTCGAGCACGAGCCGTCGCATCGCA ATCGCGTGTCGTTCCTGCAGATCGCGCCGTCGACCCGCGCGGAGCTGCGCGCGTACCAGGACATCCGGCTACAGCTCGAA GGGGAGTCGGGGCGCATCAACGGACGCTTCGCCGAGCTCGACTGGGCGCCGATCCTCTATATCCATCGTCAGTACGACCG CCAGCTGCTCGCTGCGCTGTACCGGCTCGCGCGGGTCGGCTACGTGACGCCGCTGCGCGACGGGATGAATCTCGTCGCGA AGGAATACGTGTCCGCGCAGAATCCGGAGGATCCGGGCGTGCTCGTACTGTCGCGCTTCGCGGGCGCCGCACGCGAGTTG ACGGGGGCGCTGATCGTCAATCCGATCGATATCGACGGAATGGCCGACGCGTTGTCGCAGGCGCTGACGATGCCGCTCGC CGAGCGGCGCGCGCGTTATACGGACATGATTGCGCAGCTTCGCGAGAACAACGTGTCGGTGTGGCGCGACAACTTCCTGC GCGATCTTCAGCACGCGTAA
Upstream 100 bases:
>100_bases AGGTCGGCGCGGGCGAGACGTCCGCCCGCATGCGGCTCGATTCGGTCGACGCGCTGCATGAGCAGATCGCGTGCTGGCTT GGTGCGGGGCAGTCGGACGC
Downstream 100 bases:
>100_bases CCGGCGTCATCGAGCAATAAAAAAAGCCGCAGTGCGACGCGCACTGCGGCTTTTTTGTTGGGTGCGGGCCGGCGTGTCAG GCCGCGCGTTCGCCGGTCGG
Product: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEEHGPVTFATIGLSRRDYDQYYRG FSNATLWPAFHYRTDLIQYDRHEFEGYSRVNVWLAQQLVPLLQDDDVIWVHDYHLIPFARALRAAGVKNRIGFFLHIPFP AAQVLVNVPPHRDLVESLCAFDLIGFQTEPDLRAFCDYVESEADGVIERDGHLATVRAFGRTLRAAAYPIGVHPDEIASL AQAGEHGKAVRTLAISLRGRKLIMSVDRLDYSKGLVERFRAFEKLLEHEPSHRNRVSFLQIAPSTRAELRAYQDIRLQLE GESGRINGRFAELDWAPILYIHRQYDRQLLAALYRLARVGYVTPLRDGMNLVAKEYVSAQNPEDPGVLVLSRFAGAAREL TGALIVNPIDIDGMADALSQALTMPLAERRARYTDMIAQLRENNVSVWRDNFLRDLQHA
Sequences:
>Translated_459_residues MSRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEEHGPVTFATIGLSRRDYDQYYRG FSNATLWPAFHYRTDLIQYDRHEFEGYSRVNVWLAQQLVPLLQDDDVIWVHDYHLIPFARALRAAGVKNRIGFFLHIPFP AAQVLVNVPPHRDLVESLCAFDLIGFQTEPDLRAFCDYVESEADGVIERDGHLATVRAFGRTLRAAAYPIGVHPDEIASL AQAGEHGKAVRTLAISLRGRKLIMSVDRLDYSKGLVERFRAFEKLLEHEPSHRNRVSFLQIAPSTRAELRAYQDIRLQLE GESGRINGRFAELDWAPILYIHRQYDRQLLAALYRLARVGYVTPLRDGMNLVAKEYVSAQNPEDPGVLVLSRFAGAAREL TGALIVNPIDIDGMADALSQALTMPLAERRARYTDMIAQLRENNVSVWRDNFLRDLQHA >Mature_458_residues SRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEEHGPVTFATIGLSRRDYDQYYRGF SNATLWPAFHYRTDLIQYDRHEFEGYSRVNVWLAQQLVPLLQDDDVIWVHDYHLIPFARALRAAGVKNRIGFFLHIPFPA AQVLVNVPPHRDLVESLCAFDLIGFQTEPDLRAFCDYVESEADGVIERDGHLATVRAFGRTLRAAAYPIGVHPDEIASLA QAGEHGKAVRTLAISLRGRKLIMSVDRLDYSKGLVERFRAFEKLLEHEPSHRNRVSFLQIAPSTRAELRAYQDIRLQLEG ESGRINGRFAELDWAPILYIHRQYDRQLLAALYRLARVGYVTPLRDGMNLVAKEYVSAQNPEDPGVLVLSRFAGAARELT GALIVNPIDIDGMADALSQALTMPLAERRARYTDMIAQLRENNVSVWRDNFLRDLQHA
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=458, Percent_Identity=53.4934497816594, Blast_Score=483, Evalue=1e-137, Organism=Caenorhabditis elegans, GI115533558, Length=417, Percent_Identity=29.2565947242206, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI115533560, Length=419, Percent_Identity=29.1169451073986, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI71987012, Length=416, Percent_Identity=29.3269230769231, Blast_Score=149, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6319602, Length=470, Percent_Identity=32.1276595744681, Blast_Score=270, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6323537, Length=434, Percent_Identity=25.8064516129032, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320279, Length=403, Percent_Identity=26.0545905707196, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323917, Length=376, Percent_Identity=25.531914893617, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920676, Length=486, Percent_Identity=34.7736625514403, Blast_Score=274, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 51629; Mature: 51498
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEEHG CCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCCEEECCCCEEEEECCC PVTFATIGLSRRDYDQYYRGFSNATLWPAFHYRTDLIQYDRHEFEGYSRVNVWLAQQLVP CEEEEEECCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLQDDDVIWVHDYHLIPFARALRAAGVKNRIGFFLHIPFPAAQVLVNVPPHRDLVESLCA HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHEEECCCCHHHHHHHHH FDLIGFQTEPDLRAFCDYVESEADGVIERDGHLATVRAFGRTLRAAAYPIGVHPDEIASL HHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHH AQAGEHGKAVRTLAISLRGRKLIMSVDRLDYSKGLVERFRAFEKLLEHEPSHRNRVSFLQ HHCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE IAPSTRAELRAYQDIRLQLEGESGRINGRFAELDWAPILYIHRQYDRQLLAALYRLARVG ECCCCHHHHHHEEEEEEEEECCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCC YVTPLRDGMNLVAKEYVSAQNPEDPGVLVLSRFAGAARELTGALIVNPIDIDGMADALSQ CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCHHHHHCCEEEEECCCCCHHHHHHHH ALTMPLAERRARYTDMIAQLRENNVSVWRDNFLRDLQHA HHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure SRLIIVSNRVAPISEGEPAAGGLAIGVYDALKETGGMWFGWSGEVVASGAPQIRVEEHG CCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCCEEECCCCEEEEECCC PVTFATIGLSRRDYDQYYRGFSNATLWPAFHYRTDLIQYDRHEFEGYSRVNVWLAQQLVP CEEEEEECCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLQDDDVIWVHDYHLIPFARALRAAGVKNRIGFFLHIPFPAAQVLVNVPPHRDLVESLCA HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHEEECCCCHHHHHHHHH FDLIGFQTEPDLRAFCDYVESEADGVIERDGHLATVRAFGRTLRAAAYPIGVHPDEIASL HHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHH AQAGEHGKAVRTLAISLRGRKLIMSVDRLDYSKGLVERFRAFEKLLEHEPSHRNRVSFLQ HHCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE IAPSTRAELRAYQDIRLQLEGESGRINGRFAELDWAPILYIHRQYDRQLLAALYRLARVG ECCCCHHHHHHEEEEEEEEECCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCC YVTPLRDGMNLVAKEYVSAQNPEDPGVLVLSRFAGAARELTGALIVNPIDIDGMADALSQ CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCHHHHHCCEEEEECCCCCHHHHHHHH ALTMPLAERRARYTDMIAQLRENNVSVWRDNFLRDLQHA HHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA