| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is otsB [H]
Identifier: 78065741
GI number: 78065741
Start: 1201752
End: 1202504
Strand: Direct
Name: otsB [H]
Synonym: Bcep18194_A4269
Alternate gene names: 78065741
Gene position: 1201752-1202504 (Clockwise)
Preceding gene: 78065737
Following gene: 78065742
Centisome position: 32.53
GC content: 69.19
Gene sequence:
>753_bases ATGCAATCCGTTCCGGCTTCCCTGTCCCTGACCGATACCGCGTTCTTCTTCGACTTCGACGGCACGCTCGTCGAGTTGGC GCCGACGCCCGACAGCATTCATGTTCCGCCGTCGCTGCTGACGCTGCTCGACGAGCTGCAGCGCCGCTCGCACGGCGCGG TCGCGATCGTGTCCGGGCGCGGGATCGACAACATCGACACGTTCCTGAAGATGCCCGACATGCCGATCGCCGGCCTGCAC GGCGCGGAGCGTCGCGATGCGAACGGCGACACGCAACGTATCGGCTTCAACGACGAACGCCTGCTGCGCATCGAGCGCGA GCTGGCGGCCGTCGTCGACCGTCATCCGGGCATGCTGCTCGAAATCAAGGGCGCGGCCGTCGCGCTGCACTACCGCAACG CGCCCGAGCGCGAGGCGGCGGCGCGCGCGGCCACCGAGCGCCTCGTCGCCGACTATGCCGATGCGTATGTGCTGCAGCCC GGCAAGATGGTGTTCGAGATCAAGCCGAAAGGCGTCGACAAGGGGCGCGCGCTCGCCGCGTTCCTCGACGAGCCGCCGTT TGCCGGCCGCGTGCCGGTGTTCGCGGGCGACGACCTGACCGACGAGAAGGGCTTCGCGGTGGTCAACGCGCGCGGCGGCC TGTCGATCAAGGTCGGCGCGGGCGAGACGTCCGCCCGCATGCGGCTCGATTCGGTCGACGCGCTGCATGAGCAGATCGCG TGCTGGCTTGGTGCGGGGCAGTCGGACGCATGA
Upstream 100 bases:
>100_bases TTTCGCCCATCTCGATGCGCAGGCGCGGTAAGATGCGCACAATTCCATTCGCGCAGCGGCCGCCCGGCGTTTGCCGGCCG GCCCTCACACTATCGAATCG
Downstream 100 bases:
>100_bases GTCGCCTCATCATTGTTTCAAACCGCGTTGCGCCGATTTCGGAAGGCGAACCGGCGGCGGGTGGTCTCGCGATCGGCGTC TACGATGCGCTGAAGGAGAC
Product: HAD family hydrolase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQSVPASLSLTDTAFFFDFDGTLVELAPTPDSIHVPPSLLTLLDELQRRSHGAVAIVSGRGIDNIDTFLKMPDMPIAGLH GAERRDANGDTQRIGFNDERLLRIERELAAVVDRHPGMLLEIKGAAVALHYRNAPEREAAARAATERLVADYADAYVLQP GKMVFEIKPKGVDKGRALAAFLDEPPFAGRVPVFAGDDLTDEKGFAVVNARGGLSIKVGAGETSARMRLDSVDALHEQIA CWLGAGQSDA
Sequences:
>Translated_250_residues MQSVPASLSLTDTAFFFDFDGTLVELAPTPDSIHVPPSLLTLLDELQRRSHGAVAIVSGRGIDNIDTFLKMPDMPIAGLH GAERRDANGDTQRIGFNDERLLRIERELAAVVDRHPGMLLEIKGAAVALHYRNAPEREAAARAATERLVADYADAYVLQP GKMVFEIKPKGVDKGRALAAFLDEPPFAGRVPVFAGDDLTDEKGFAVVNARGGLSIKVGAGETSARMRLDSVDALHEQIA CWLGAGQSDA >Mature_250_residues MQSVPASLSLTDTAFFFDFDGTLVELAPTPDSIHVPPSLLTLLDELQRRSHGAVAIVSGRGIDNIDTFLKMPDMPIAGLH GAERRDANGDTQRIGFNDERLLRIERELAAVVDRHPGMLLEIKGAAVALHYRNAPEREAAARAATERLVADYADAYVLQP GKMVFEIKPKGVDKGRALAAFLDEPPFAGRVPVFAGDDLTDEKGFAVVNARGGLSIKVGAGETSARMRLDSVDALHEQIA CWLGAGQSDA
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=219, Percent_Identity=49.3150684931507, Blast_Score=206, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320279, Length=223, Percent_Identity=26.9058295964126, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI19920676, Length=233, Percent_Identity=28.755364806867, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI221473368, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI20129307, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24582490, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 26870; Mature: 26870
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVPASLSLTDTAFFFDFDGTLVELAPTPDSIHVPPSLLTLLDELQRRSHGAVAIVSGR CCCCCCCEEEECEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC GIDNIDTFLKMPDMPIAGLHGAERRDANGDTQRIGFNDERLLRIERELAAVVDRHPGMLL CCCCHHHHHCCCCCCEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEE EIKGAAVALHYRNAPEREAAARAATERLVADYADAYVLQPGKMVFEIKPKGVDKGRALAA EECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCEEEE FLDEPPFAGRVPVFAGDDLTDEKGFAVVNARGGLSIKVGAGETSARMRLDSVDALHEQIA ECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEHHHHHHHHHHHH CWLGAGQSDA HHHCCCCCCC >Mature Secondary Structure MQSVPASLSLTDTAFFFDFDGTLVELAPTPDSIHVPPSLLTLLDELQRRSHGAVAIVSGR CCCCCCCEEEECEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC GIDNIDTFLKMPDMPIAGLHGAERRDANGDTQRIGFNDERLLRIERELAAVVDRHPGMLL CCCCHHHHHCCCCCCEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEE EIKGAAVALHYRNAPEREAAARAATERLVADYADAYVLQPGKMVFEIKPKGVDKGRALAA EECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCEEEE FLDEPPFAGRVPVFAGDDLTDEKGFAVVNARGGLSIKVGAGETSARMRLDSVDALHEQIA ECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEHHHHHHHHHHHH CWLGAGQSDA HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]