| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is map [H]
Identifier: 78065733
GI number: 78065733
Start: 1195397
End: 1196203
Strand: Direct
Name: map [H]
Synonym: Bcep18194_A4261
Alternate gene names: 78065733
Gene position: 1195397-1196203 (Clockwise)
Preceding gene: 78065732
Following gene: 78065736
Centisome position: 32.36
GC content: 66.05
Gene sequence:
>807_bases ATGGCGAAGCGAGAAATCCCGATCCGCGGCGCCGCGGAAATCGCCAAGTCGCGCGAAGCCGCGAAGCTCGCGTCGCAGGT GCTGACGATGATCACCGAGCACGTGAAGCCGGGTGTCACCACCGACGAGCTGGACGTGCTCTGCCGCAACTACATCGTCG ACGTGCTCGGTGCGATCCCGGCGAACATCGGCTACCACGGTTATCCGAAGACGCTCTGCACGTCGGTCAATCACGTGGTG TGTCACGGCATTCCGACGTCGCGGCCGCTGCGCGACGGCGACATCGTGAACCTCGACATTGCGGTGATCAAGGACGGCTG GTTCGGCGATACGAGCCGCATGTATTTCGTCGGCGAACCGAACGAGCTCGCGCGTCGGCTTGTCGCGACGACCTATGAGG CGATGCACGCGGGCATTCGCGCGGTGCGTCCGGGCGCAACGCTCGGCGACGTCGGCTACGCGATCCAGCAGGTCGCGCAT CGCGAAGGATTCAGCGTGGTTCGCGAGTACTGCGGGCACGGCATCGGCGATGTCTATCACGACGAGCCGCAGGTGCTTCA CTACGGCCGCCCGGGCACCGGCGTGCCGCTCCGGCCGGGGATGATCTTCACGATCGAGCCGATGCTCAACGCAGGCAAGC GCGACACGCGCATGCTGGCGGACGGCTGGACGGTCGTCACGAAGGACCATTCGCTGTCGGCGCAATGGGAGCACATGGTC GTGGTGACCGAGACGGGCTTCGAGGTGCTGTCCGAGGACGTGAAGCCGCAGGCGTTTCCGGTGCTGTCCGGCACGCACGC CGCCTGA
Upstream 100 bases:
>100_bases CCTACGGGGACATCTGCCGGATGCTGATCGAGGCCGAAGCGCGGGGCGGTGAAGCGGGGCCGGCGGAATCGGTCGAGCAC GGCATCGAGCAGGTGGCGTA
Downstream 100 bases:
>100_bases TATCTGCAGTGCGCCGCGAACGGCGGTGCGGCGTCACAGTGAAACGGGCCCCTTTGCGGGGCCCGTTTCGTTTTCGTTCC AGGTTGCGCGGCGCGATTTA
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAKREIPIRGAAEIAKSREAAKLASQVLTMITEHVKPGVTTDELDVLCRNYIVDVLGAIPANIGYHGYPKTLCTSVNHVV CHGIPTSRPLRDGDIVNLDIAVIKDGWFGDTSRMYFVGEPNELARRLVATTYEAMHAGIRAVRPGATLGDVGYAIQQVAH REGFSVVREYCGHGIGDVYHDEPQVLHYGRPGTGVPLRPGMIFTIEPMLNAGKRDTRMLADGWTVVTKDHSLSAQWEHMV VVTETGFEVLSEDVKPQAFPVLSGTHAA
Sequences:
>Translated_268_residues MAKREIPIRGAAEIAKSREAAKLASQVLTMITEHVKPGVTTDELDVLCRNYIVDVLGAIPANIGYHGYPKTLCTSVNHVV CHGIPTSRPLRDGDIVNLDIAVIKDGWFGDTSRMYFVGEPNELARRLVATTYEAMHAGIRAVRPGATLGDVGYAIQQVAH REGFSVVREYCGHGIGDVYHDEPQVLHYGRPGTGVPLRPGMIFTIEPMLNAGKRDTRMLADGWTVVTKDHSLSAQWEHMV VVTETGFEVLSEDVKPQAFPVLSGTHAA >Mature_267_residues AKREIPIRGAAEIAKSREAAKLASQVLTMITEHVKPGVTTDELDVLCRNYIVDVLGAIPANIGYHGYPKTLCTSVNHVVC HGIPTSRPLRDGDIVNLDIAVIKDGWFGDTSRMYFVGEPNELARRLVATTYEAMHAGIRAVRPGATLGDVGYAIQQVAHR EGFSVVREYCGHGIGDVYHDEPQVLHYGRPGTGVPLRPGMIFTIEPMLNAGKRDTRMLADGWTVVTKDHSLSAQWEHMVV VTETGFEVLSEDVKPQAFPVLSGTHAA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=253, Percent_Identity=43.0830039525692, Blast_Score=218, Evalue=4e-57, Organism=Homo sapiens, GI40385867, Length=247, Percent_Identity=39.2712550607287, Blast_Score=204, Evalue=7e-53, Organism=Escherichia coli, GI1786364, Length=247, Percent_Identity=56.2753036437247, Blast_Score=297, Evalue=6e-82, Organism=Escherichia coli, GI1789275, Length=285, Percent_Identity=25.6140350877193, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71996291, Length=252, Percent_Identity=38.8888888888889, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6323273, Length=247, Percent_Identity=42.5101214574899, Blast_Score=217, Evalue=2e-57, Organism=Drosophila melanogaster, GI21355531, Length=248, Percent_Identity=41.9354838709677, Blast_Score=205, Evalue=3e-53, Organism=Drosophila melanogaster, GI24583427, Length=246, Percent_Identity=36.5853658536585, Blast_Score=184, Evalue=5e-47,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29251; Mature: 29120
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKREIPIRGAAEIAKSREAAKLASQVLTMITEHVKPGVTTDELDVLCRNYIVDVLGAIP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ANIGYHGYPKTLCTSVNHVVCHGIPTSRPLRDGDIVNLDIAVIKDGWFGDTSRMYFVGEP CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECH NELARRLVATTYEAMHAGIRAVRPGATLGDVGYAIQQVAHREGFSVVREYCGHGIGDVYH HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC DEPQVLHYGRPGTGVPLRPGMIFTIEPMLNAGKRDTRMLADGWTVVTKDHSLSAQWEHMV CCCCEEEECCCCCCCCCCCCEEEEECHHHCCCCCCCEEEECCEEEEEECCCCCCCEEEEE VVTETGFEVLSEDVKPQAFPVLSGTHAA EEECCCHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure AKREIPIRGAAEIAKSREAAKLASQVLTMITEHVKPGVTTDELDVLCRNYIVDVLGAIP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ANIGYHGYPKTLCTSVNHVVCHGIPTSRPLRDGDIVNLDIAVIKDGWFGDTSRMYFVGEP CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECH NELARRLVATTYEAMHAGIRAVRPGATLGDVGYAIQQVAHREGFSVVREYCGHGIGDVYH HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC DEPQVLHYGRPGTGVPLRPGMIFTIEPMLNAGKRDTRMLADGWTVVTKDHSLSAQWEHMV CCCCEEEECCCCCCCCCCCCEEEEECHHHCCCCCCCEEEECCEEEEEECCCCCCCEEEEE VVTETGFEVLSEDVKPQAFPVLSGTHAA EEECCCHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]