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The map label for this gene is yhhS [C]

Identifier: 78065397

GI number: 78065397

Start: 838375

End: 839589

Strand: Reverse

Name: yhhS [C]

Synonym: Bcep18194_A3923

Alternate gene names: 78065397

Gene position: 839589-838375 (Counterclockwise)

Preceding gene: 78065402

Following gene: 78065395

Centisome position: 22.73

GC content: 70.78

Gene sequence:

>1215_bases
ATGTCAACCGATTCCGCCACACCGCCGCGCAGCGGGTTCGCGGTCACGCTGCAAATCGTGTCCGTCGTCTGCTTCACGTT
CATCTGCTACCTGACCATCGGCCTGCCGCTCGCGGTGCTGCCGGGCTTCGTCCATGACGACCTCGGCTTTTCCGCGATCG
TCGCGGGCGGCGCGATCAGCGTCCAGTATTTCGCGACGCTCGCGTCGCGGCCGCTCGCCGGGCGCCTGGCCGATACGCTC
GGCCCGAAGCAGACGGTACTGCGCGGGCTGGTCGGTTGCGGCGTGTCGGGCGTGCTGCTGCTCGTCGCGCTGCTGCTCGC
GCACTGGCCGGTCGCGAGCCTCGTGCTGCTGGTCGCGAGCCGGCTCGTGCTCGGCGTCGGCGAAAGCCTGTGCGGCACCG
GTGCGATCCTGTGGGGCATCGGCCGGGTCGGCGTCACACACAACGCGAAGGTGATCTCGTGGAACGGTATCGCGACCTAC
GGCGCGCTCGCGCTCGGCGCGCCGGTCGGCGTCGCGATCGCGCATACGCTGAATCCGGCGCTGATCGGCGTGATCGTGAT
CGCGCTGGCCGCAACCGGCTTCTACCTCGCGCGGCTGATCGCCTCCGTGCCGCTCGTGCACGGCGAGCGGATGTCGTACG
CGAGCGTGTTCACGCGCGTGCTGCCGCACGGCCTCGGCCTCGCGCTCGGCTCGGCCGGCTTCGGCTCGATCGCAACCTTC
GTCACGCTGTACTACGCGGCGCGCCACTGGCCGAACGCCGCACTGTCGCTGACCGTGTTCGGTACGCTGTTCATCGGTGC
GCGCCTGCTGTTCGCGAACACGATCAAGACCTACGGCGGCTTCCGCGTCGCGATCGTGTCGTTCGCATTCGAATGCTCGG
GCCTCGTGCTGCTGTGGCTCGCGCCCGTGCCGCACGTCGCGCTGATCGGCGCCGCGCTGACCGGCTTCGGCTTCGCACTG
ATCTTCCCGGCGCTCGGCGTCGAGGCCGTCGCGCTCGTGCCGCCCGCGAGCCGTGGCGCGGCGCTGTCCGCGTACTCGGT
GTTCCTCGACCTGTCGCTCGGCATCACGGGCCCGCTTGCCGGCTATGTCGCGGGCGCGTTCGGCTATCCGCAGGTGTTCC
TGTTCGCGGCGGTGGCGGCTGCCGCGGGCGTCGCGCTGTCGATGGTGCTGTATCAGCGGCAGGCGCGGGTCGAGGGAAGC
GGCGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
GATTAACTAAATGGTACCTGCGTGAAAACCGGTTCCATGGGAAAATCCCGATTCCCTTTTTCGCCGTCCTCCGTCCGTTT
CGTTCATTCGTTCCGACCCC

Downstream 100 bases:

>100_bases
TCGCGCCGTTCGTTGCAAGGAGGCCGGTCGCGGATATCACGCAGCCGGCCGCCAAATGAAAAACGCCCGCATCGCGCGGG
CGTTTTTGTATCCGGACGGG

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSTDSATPPRSGFAVTLQIVSVVCFTFICYLTIGLPLAVLPGFVHDDLGFSAIVAGGAISVQYFATLASRPLAGRLADTL
GPKQTVLRGLVGCGVSGVLLLVALLLAHWPVASLVLLVASRLVLGVGESLCGTGAILWGIGRVGVTHNAKVISWNGIATY
GALALGAPVGVAIAHTLNPALIGVIVIALAATGFYLARLIASVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
VTLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTYGGFRVAIVSFAFECSGLVLLWLAPVPHVALIGAALTGFGFAL
IFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYPQVFLFAAVAAAAGVALSMVLYQRQARVEGS
GAAA

Sequences:

>Translated_404_residues
MSTDSATPPRSGFAVTLQIVSVVCFTFICYLTIGLPLAVLPGFVHDDLGFSAIVAGGAISVQYFATLASRPLAGRLADTL
GPKQTVLRGLVGCGVSGVLLLVALLLAHWPVASLVLLVASRLVLGVGESLCGTGAILWGIGRVGVTHNAKVISWNGIATY
GALALGAPVGVAIAHTLNPALIGVIVIALAATGFYLARLIASVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
VTLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTYGGFRVAIVSFAFECSGLVLLWLAPVPHVALIGAALTGFGFAL
IFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYPQVFLFAAVAAAAGVALSMVLYQRQARVEGS
GAAA
>Mature_403_residues
STDSATPPRSGFAVTLQIVSVVCFTFICYLTIGLPLAVLPGFVHDDLGFSAIVAGGAISVQYFATLASRPLAGRLADTLG
PKQTVLRGLVGCGVSGVLLLVALLLAHWPVASLVLLVASRLVLGVGESLCGTGAILWGIGRVGVTHNAKVISWNGIATYG
ALALGAPVGVAIAHTLNPALIGVIVIALAATGFYLARLIASVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATFV
TLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTYGGFRVAIVSFAFECSGLVLLWLAPVPHVALIGAALTGFGFALI
FPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYPQVFLFAAVAAAAGVALSMVLYQRQARVEGSG
AAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=396, Percent_Identity=50.7575757575758, Blast_Score=348, Evalue=5e-97,
Organism=Escherichia coli, GI1788662, Length=396, Percent_Identity=44.4444444444444, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41133; Mature: 41002

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDSATPPRSGFAVTLQIVSVVCFTFICYLTIGLPLAVLPGFVHDDLGFSAIVAGGAIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCHHHHHCCCCHH
VQYFATLASRPLAGRLADTLGPKQTVLRGLVGCGVSGVLLLVALLLAHWPVASLVLLVAS
HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RLVLGVGESLCGTGAILWGIGRVGVTHNAKVISWNGIATYGALALGAPVGVAIAHTLNPA
HHHHHCCCHHHHCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHCCHH
LIGVIVIALAATGFYLARLIASVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VTLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTYGGFRVAIVSFAFECSGLVLLWL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEC
APVPHVALIGAALTGFGFALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
GYVAGAFGYPQVFLFAAVAAAAGVALSMVLYQRQARVEGSGAAA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STDSATPPRSGFAVTLQIVSVVCFTFICYLTIGLPLAVLPGFVHDDLGFSAIVAGGAIS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCHHHHHCCCCHH
VQYFATLASRPLAGRLADTLGPKQTVLRGLVGCGVSGVLLLVALLLAHWPVASLVLLVAS
HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RLVLGVGESLCGTGAILWGIGRVGVTHNAKVISWNGIATYGALALGAPVGVAIAHTLNPA
HHHHHCCCHHHHCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHCCHH
LIGVIVIALAATGFYLARLIASVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VTLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTYGGFRVAIVSFAFECSGLVLLWL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEC
APVPHVALIGAALTGFGFALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
GYVAGAFGYPQVFLFAAVAAAAGVALSMVLYQRQARVEGSGAAA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA