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The map label for this gene is ybgC [C]

Identifier: 78065367

GI number: 78065367

Start: 809397

End: 809882

Strand: Reverse

Name: ybgC [C]

Synonym: Bcep18194_A3893

Alternate gene names: 78065367

Gene position: 809882-809397 (Counterclockwise)

Preceding gene: 78065368

Following gene: 78065366

Centisome position: 21.92

GC content: 68.52

Gene sequence:

>486_bases
ATGCGCGCCATGACCCAGCCTACCCGCTCCCCGGAAGCGCCCTCCGGCTTCATCTGGCCGGTGCGCGTGTACTACGAGGA
TACCGACGCAGGCGGCATCGTCTTCTATGCCAACTACCTGAAGTTCTTCGAACGCGCCCGCACCGAGTGGCTGCGCGCTT
GCGGCATCGACCAGCGTCAGCTCGCCGACGACACCGACGCGATCTTCGTCGTCCGCAGCACGTCGCTCGACTACCGCGCA
CCGGCGCGACTCGACGACACACTGGCGATCACGAGCCGGCCCGGACGCATCGGCCGCGCATCGGTGGAATTCACGCAGGA
AGCCTGGTGCGGAAACACGCTGCTCGTGGCCGGACACATCCGTCTCGGCTGCGTCGCCCGTACCGGCATCCGGCCCGCGG
CCATCCCGCCGGCCGTGCTCGACGCGCTGCAGCGCGGGCCCGTCATCGACGACGGGCAGACTGCACTGTCAACGAAGCTC
GCATGA

Upstream 100 bases:

>100_bases
CCACGCGGGCCGGCCCCTTCCGGGCCGGCCCGCAGTGTGCTACGGCATACTACATTCCGTTACGAATCGGTTACGAATCA
GGCTCCTGCCTTCCGGTAGA

Downstream 100 bases:

>100_bases
GCCCCGTTTAGACAAAGCCTATGAACTTGCCTTTCTGATTCGATACTAAGCAAGGTTCGGCGTCAGGCATGGCCGGCGCG
CCGCGCCACACGCATACCGG

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRAMTQPTRSPEAPSGFIWPVRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGIDQRQLADDTDAIFVVRSTSLDYRA
PARLDDTLAITSRPGRIGRASVEFTQEAWCGNTLLVAGHIRLGCVARTGIRPAAIPPAVLDALQRGPVIDDGQTALSTKL
A

Sequences:

>Translated_161_residues
MRAMTQPTRSPEAPSGFIWPVRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGIDQRQLADDTDAIFVVRSTSLDYRA
PARLDDTLAITSRPGRIGRASVEFTQEAWCGNTLLVAGHIRLGCVARTGIRPAAIPPAVLDALQRGPVIDDGQTALSTKL
A
>Mature_161_residues
MRAMTQPTRSPEAPSGFIWPVRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGIDQRQLADDTDAIFVVRSTSLDYRA
PARLDDTLAITSRPGRIGRASVEFTQEAWCGNTLLVAGHIRLGCVARTGIRPAAIPPAVLDALQRGPVIDDGQTALSTKL
A

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=130, Percent_Identity=43.8461538461538, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17715; Mature: 17715

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMTQPTRSPEAPSGFIWPVRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGIDQRQ
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHH
LADDTDAIFVVRSTSLDYRAPARLDDTLAITSRPGRIGRASVEFTQEAWCGNTLLVAGHI
HCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHCCCCEEEEECCE
RLGCVARTGIRPAAIPPAVLDALQRGPVIDDGQTALSTKLA
EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MRAMTQPTRSPEAPSGFIWPVRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGIDQRQ
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHH
LADDTDAIFVVRSTSLDYRAPARLDDTLAITSRPGRIGRASVEFTQEAWCGNTLLVAGHI
HCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHCCCCEEEEECCE
RLGCVARTGIRPAAIPPAVLDALQRGPVIDDGQTALSTKLA
EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]