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The map label for this gene is yphB [H]

Identifier: 78065183

GI number: 78065183

Start: 595898

End: 596959

Strand: Direct

Name: yphB [H]

Synonym: Bcep18194_A3707

Alternate gene names: 78065183

Gene position: 595898-596959 (Clockwise)

Preceding gene: 78065182

Following gene: 78065184

Centisome position: 16.13

GC content: 73.16

Gene sequence:

>1062_bases
ATGACCGCCACGTCCTCGCGCGCATCGTCGTCCACCAGCCAGTCGCGCCGCGCGCGCCTGGCCGCCGCCGCGCAGCCGGT
CAGCCCCGGCCCGCAGACAGCAGCCTTTGCGCAGGGCGTCGGCGCCGCGCATGCGGCGGCCGTCACGCTGTCGAATGCAT
CGCTGCGGCTCGACGTGTTGCCGCATCTCGGCGGCGGCATCGCGCGCTTCGACTGGCGTGGCGACAACGGCGCGCTGATG
CCGGTGTTCCGCCGCTGCGAGCACCCGGAGACGGCGACGGACCCGAACGAGCTCGCGTGCTATCCGCTGTTGCCGTACTC
GAACCGGATCGGCGACGGGCGGTTCGAATGCGACGGGCGTCGCGTCGCGGTGCCGCGCAACCGCCGCGACGAACCGCTGC
CGATCCACGGCGACGGTTGGCTCGCGCCGTGGCAGGTGGACGATGCGACCGGCACGTCGCTGCAACTGTCGCTCGATCGC
ACCGCCGGCGCGCCGTATGCATTCCGCGCGATCCAGTCGTTCGAGCTCGACGACGCGACGCTGTCGATCGCGCTGACGAT
CGAGAACGCGGGGCGCGCGCGGCTGCCGTTCGGGCTCGGCGTGCATCCGTTCCTCGTGCGCGACGCCGCGACCGAGCTGG
CCGCGGCTGCCGGCGGCCTGTGGCTGTCGGGCGCCGATTTCCTGCCGGTGCGGCACGTGAGCGTGCCGCCAGCCTGGCAG
TTCGGCGTCGCGTATCCGCTGCCCGCCGCGCTCGTCAATCATGCGTTCACCGGCTGGGGCGGCCACGCGACGGTGAGCTG
GCCGCGCCGCGGGCTGTCGCTGACGGTGGCGGCCGACGCCGACGCGTACGTGCTCTATACGCCGCCCGGCGAGGATTTCT
TCTGCTTCGAGCCGGTCGATCATCCGATCAATGCGGTGAACCTGCCGGGCGGCGCGACCGCGCACGGGATGACGCTGCTC
GCGCCCGGCGAGCGGCTCACGCGGCGTTTCGCGTTCACCGTCGAGCGTGCCGATGCGCGCAGCAATGCGGCGACACGCGA
GGCGCGCCGGCGACGCGGGTAA

Upstream 100 bases:

>100_bases
AGCCGGATGATCACCGCGCAGGACGTGATCGTCGACGGCGGCTGGGCCTGACCGTTCGCACGACCCGCATCGTTTCTTCG
ACGAAGGAAAGGAGTTCACC

Downstream 100 bases:

>100_bases
AATACGCGGTCTACCAACGGTTTGCCGCGAGTACCCGCCATGTCTTCCCCGCTTACTTTCATCGAATCGCTGCGCGCCGC
GTGGCAGCGCACCAATTCGC

Product: aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTATSSRASSSTSQSRRARLAAAAQPVSPGPQTAAFAQGVGAAHAAAVTLSNASLRLDVLPHLGGGIARFDWRGDNGALM
PVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGRRVAVPRNRRDEPLPIHGDGWLAPWQVDDATGTSLQLSLDR
TAGAPYAFRAIQSFELDDATLSIALTIENAGRARLPFGLGVHPFLVRDAATELAAAAGGLWLSGADFLPVRHVSVPPAWQ
FGVAYPLPAALVNHAFTGWGGHATVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGATAHGMTLL
APGERLTRRFAFTVERADARSNAATREARRRRG

Sequences:

>Translated_353_residues
MTATSSRASSSTSQSRRARLAAAAQPVSPGPQTAAFAQGVGAAHAAAVTLSNASLRLDVLPHLGGGIARFDWRGDNGALM
PVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGRRVAVPRNRRDEPLPIHGDGWLAPWQVDDATGTSLQLSLDR
TAGAPYAFRAIQSFELDDATLSIALTIENAGRARLPFGLGVHPFLVRDAATELAAAAGGLWLSGADFLPVRHVSVPPAWQ
FGVAYPLPAALVNHAFTGWGGHATVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGATAHGMTLL
APGERLTRRFAFTVERADARSNAATREARRRRG
>Mature_352_residues
TATSSRASSSTSQSRRARLAAAAQPVSPGPQTAAFAQGVGAAHAAAVTLSNASLRLDVLPHLGGGIARFDWRGDNGALMP
VFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGRRVAVPRNRRDEPLPIHGDGWLAPWQVDDATGTSLQLSLDRT
AGAPYAFRAIQSFELDDATLSIALTIENAGRARLPFGLGVHPFLVRDAATELAAAAGGLWLSGADFLPVRHVSVPPAWQF
GVAYPLPAALVNHAFTGWGGHATVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGATAHGMTLLA
PGERLTRRFAFTVERADARSNAATREARRRRG

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=297, Percent_Identity=32.6599326599327, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1790311, Length=222, Percent_Identity=26.5765765765766, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 37645; Mature: 37513

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSSRASSSTSQSRRARLAAAAQPVSPGPQTAAFAQGVGAAHAAAVTLSNASLRLDVL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEEEEEEC
PHLGGGIARFDWRGDNGALMPVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGR
CCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
RVAVPRNRRDEPLPIHGDGWLAPWQVDDATGTSLQLSLDRTAGAPYAFRAIQSFELDDAT
EEECCCCCCCCCCEECCCCCCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCE
LSIALTIENAGRARLPFGLGVHPFLVRDAATELAAAAGGLWLSGADFLPVRHVSVPPAWQ
EEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCC
FGVAYPLPAALVNHAFTGWGGHATVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVD
CCCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCEEEECCCC
HPINAVNLPGGATAHGMTLLAPGERLTRRFAFTVERADARSNAATREARRRRG
CCCCEEECCCCCCCCCEEEEECCHHHHHEEEEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TATSSRASSSTSQSRRARLAAAAQPVSPGPQTAAFAQGVGAAHAAAVTLSNASLRLDVL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEEEEEEC
PHLGGGIARFDWRGDNGALMPVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGR
CCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
RVAVPRNRRDEPLPIHGDGWLAPWQVDDATGTSLQLSLDRTAGAPYAFRAIQSFELDDAT
EEECCCCCCCCCCEECCCCCCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCE
LSIALTIENAGRARLPFGLGVHPFLVRDAATELAAAAGGLWLSGADFLPVRHVSVPPAWQ
EEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCC
FGVAYPLPAALVNHAFTGWGGHATVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVD
CCCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCEEEECCCC
HPINAVNLPGGATAHGMTLLAPGERLTRRFAFTVERADARSNAATREARRRRG
CCCCEEECCCCCCCCCEEEEECCHHHHHEEEEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]