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The map label for this gene is 78065110

Identifier: 78065110

GI number: 78065110

Start: 517169

End: 518320

Strand: Reverse

Name: 78065110

Synonym: Bcep18194_A3634

Alternate gene names: NA

Gene position: 518320-517169 (Counterclockwise)

Preceding gene: 78065129

Following gene: 78065106

Centisome position: 14.03

GC content: 62.15

Gene sequence:

>1152_bases
ATGAAAAAGTCGCTTCTCGCGCTCGTCGCGCTGGGCGCGTTCGCTGGCGCTGCCCATGCGCAAAGCAGCGTGACGCTTTA
CGGCATCATCGATGAAGGCCTGCTCTTCAACAACAACGCGGGCGGCAAGCACCTGTACAGCATGGCCAGCGGCGTGATGC
AAGGCAGCCGCTTCGGCATGCGCGGCACCGAAGACCTCGGTGGCGGCCTGAAGGCGATCTTCACCCTCGAAAACGGTTTT
GACGTGAACAGCGGCAAGCTCGGTCAGGGCGGCCTGATGTTCGGTCGTCAGGCTTACGTCGGCCTGTCGAGCCCGTACGG
TACGGTCACGCTGGGTCGCCAATACGACTCCGTCGTCGACTTCGTCGGCCCGCTCGAGGCAGGTGACCAGTGGGGTGGCT
ACATCGCCGCTCACCCGGGTGACCTCGACAACTTCAACAACGCCTATCGCGTGAACAACGCGGTCAAGTTCACGAGCAAC
ACCTACGGTGGCTTCTCGTTCGGCGGCGTGTACAGCTTCGGCGGTCAGGCAGGCCAGTTCTCGAAGAACCAGGTCTGGTC
GCTCGGCGCAGGCTACAACAACGGCCCGTTGGTCTTGGGCGTCGGCTACTTGAACGCACGCACGCCGAACCAGTTCGGCG
GCATGTTCAACAACGGTTCGACGTCGTCGTCGGTCTCGTCGCCGATCTACGGCGCGTACGCGAACAACGCGAACACGTAC
CAGGTCATCGGTGCCGGCGGTGCATACACGTTCGGCGCAGCGACGATCGGTGCAACGTACTCGAACACGAAGTTCAAGGG
CTTCTCGGCAGGCCCGTTCGTGAACCAGTCCGCGACGTTCAACAACGGCGAACTCAACTTCAAGTATCAGCTGACCCCGG
CGCTGATTCTCGGCGCGGCGTACGACTACACGCAAGGCAGCAAGATCAACGGCAGCTCGGCAGCCAAGTATCACCAGGGC
TCGCTGGGTGTCGACTACTTCCTGTCGAAGCGCACCGACGTCTACGCGATCGGCGTGTACCAGCACGCATCGGGCAACGT
GCTCGACGCGAACGGCAACGTGATCCAGGCAACCGCAGCGATCAACGGTCTCGCAGGTTCGAGCACCAGCAACCAGGTCG
CAGCACGCGTCGGTATCCGTCACAAGTTCTAA

Upstream 100 bases:

>100_bases
CTACATTACGTCCGACTTCTTGCGAAGTTGATGGGGCCCGTCAACAGAACATAACTATCCGCCCCGCCAGAAAAATTCAG
TGATTCTTGGAGATCCGTTA

Downstream 100 bases:

>100_bases
TCAGCTTGCCTGACAAGCCGCAGCATATTGAAGGCGCCTTCGGGCGCCTTTTTCTTTTCCGGTCGGGTGCAGCCGCAAAT
CCGAAGCGCCGCGAATCGTA

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGLLFNNNAGGKHLYSMASGVMQGSRFGMRGTEDLGGGLKAIFTLENGF
DVNSGKLGQGGLMFGRQAYVGLSSPYGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSN
TYGGFSFGGVYSFGGQAGQFSKNQVWSLGAGYNNGPLVLGVGYLNARTPNQFGGMFNNGSTSSSVSSPIYGAYANNANTY
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQSATFNNGELNFKYQLTPALILGAAYDYTQGSKINGSSAAKYHQG
SLGVDYFLSKRTDVYAIGVYQHASGNVLDANGNVIQATAAINGLAGSSTSNQVAARVGIRHKF

Sequences:

>Translated_383_residues
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGLLFNNNAGGKHLYSMASGVMQGSRFGMRGTEDLGGGLKAIFTLENGF
DVNSGKLGQGGLMFGRQAYVGLSSPYGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSN
TYGGFSFGGVYSFGGQAGQFSKNQVWSLGAGYNNGPLVLGVGYLNARTPNQFGGMFNNGSTSSSVSSPIYGAYANNANTY
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQSATFNNGELNFKYQLTPALILGAAYDYTQGSKINGSSAAKYHQG
SLGVDYFLSKRTDVYAIGVYQHASGNVLDANGNVIQATAAINGLAGSSTSNQVAARVGIRHKF
>Mature_383_residues
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGLLFNNNAGGKHLYSMASGVMQGSRFGMRGTEDLGGGLKAIFTLENGF
DVNSGKLGQGGLMFGRQAYVGLSSPYGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSN
TYGGFSFGGVYSFGGQAGQFSKNQVWSLGAGYNNGPLVLGVGYLNARTPNQFGGMFNNGSTSSSVSSPIYGAYANNANTY
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQSATFNNGELNFKYQLTPALILGAAYDYTQGSKINGSSAAKYHQG
SLGVDYFLSKRTDVYAIGVYQHASGNVLDANGNVIQATAAINGLAGSSTSNQVAARVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39821; Mature: 39821

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGLLFNNNAGGKHLYSMASGVMQGSRFGM
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCC
RGTEDLGGGLKAIFTLENGFDVNSGKLGQGGLMFGRQAYVGLSSPYGTVTLGRQYDSVVD
CCCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCEEEECCCHHHHHH
FVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSNTYGGFSFGGVYSFGGQAGQF
HHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEECCCEEECCCCCCCC
SKNQVWSLGAGYNNGPLVLGVGYLNARTPNQFGGMFNNGSTSSSVSSPIYGAYANNANTY
CCCCEEEECCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCEE
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQSATFNNGELNFKYQLTPALILGAA
EEEECCCCEEECCEEECCEECCCEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECC
YDYTQGSKINGSSAAKYHQGSLGVDYFLSKRTDVYAIGVYQHASGNVLDANGNVIQATAA
CCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEE
INGLAGSSTSNQVAARVGIRHKF
ECCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKKSLLALVALGAFAGAAHAQSSVTLYGIIDEGLLFNNNAGGKHLYSMASGVMQGSRFGM
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCC
RGTEDLGGGLKAIFTLENGFDVNSGKLGQGGLMFGRQAYVGLSSPYGTVTLGRQYDSVVD
CCCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCEEEECCCHHHHHH
FVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSNTYGGFSFGGVYSFGGQAGQF
HHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEECCCEEECCCCCCCC
SKNQVWSLGAGYNNGPLVLGVGYLNARTPNQFGGMFNNGSTSSSVSSPIYGAYANNANTY
CCCCEEEECCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCEE
QVIGAGGAYTFGAATIGATYSNTKFKGFSAGPFVNQSATFNNGELNFKYQLTPALILGAA
EEEECCCCEEECCEEECCEECCCEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECC
YDYTQGSKINGSSAAKYHQGSLGVDYFLSKRTDVYAIGVYQHASGNVLDANGNVIQATAA
CCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEE
INGLAGSSTSNQVAARVGIRHKF
ECCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]