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The map label for this gene is ydhD [C]

Identifier: 78065071

GI number: 78065071

Start: 468307

End: 468618

Strand: Reverse

Name: ydhD [C]

Synonym: Bcep18194_A3595

Alternate gene names: 78065071

Gene position: 468618-468307 (Counterclockwise)

Preceding gene: 78065072

Following gene: 78065070

Centisome position: 12.69

GC content: 58.33

Gene sequence:

>312_bases
ATGGACACCCAACAACGTATCAAGCAAATCGTCGACGAAAACCAGGTCGTGCTCTTCATGAAGGGCAACGCACAATTCCC
GATGTGCGGCTTTTCGGGCCGCGCCATCCAGGTGCTGAAGGCCTGCGGCGTCGACCAGTTCAAGACGGTCAACGTCCTCG
AAGACGACGAGATCCGCCAGGGCATCAAGGCATTCTCGAACTGGCCGACCATCCCGCAGCTCTACGTGAAGGGCGAATTC
ATCGGCGGCTCGGACATCATGATGGAGATGTACCAGTCGGGCGAACTGCAGCAACTGTTCGCCGCCGCGTAA

Upstream 100 bases:

>100_bases
GAACGGACGACAGGCGGCCGCCTGCCGGGCTGATGCCCGGCCCGCCCGGTTGAAATCCGCTATCATTTCGATCTAACGCC
CCGCTAACGCAAGGTCAGTC

Downstream 100 bases:

>100_bases
TACGCGTCGTCCCCTTTCGATGGCATCTCCCAGCGCGCCGCCACGCCGGCTGATCGTCGCGATCACCGGCGCCACCGGCG
CGATCTACGGCGTGCGGCTG

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MDTQQRIKQIVDENQVVLFMKGNAQFPMCGFSGRAIQVLKACGVDQFKTVNVLEDDEIRQGIKAFSNWPTIPQLYVKGEF
IGGSDIMMEMYQSGELQQLFAAA

Sequences:

>Translated_103_residues
MDTQQRIKQIVDENQVVLFMKGNAQFPMCGFSGRAIQVLKACGVDQFKTVNVLEDDEIRQGIKAFSNWPTIPQLYVKGEF
IGGSDIMMEMYQSGELQQLFAAA
>Mature_103_residues
MDTQQRIKQIVDENQVVLFMKGNAQFPMCGFSGRAIQVLKACGVDQFKTVNVLEDDEIRQGIKAFSNWPTIPQLYVKGEF
IGGSDIMMEMYQSGELQQLFAAA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=48.9130434782609, Blast_Score=112, Evalue=7e-26,
Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=51.6129032258064, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=48.9795918367347, Blast_Score=113, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=49.4949494949495, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=46.5116279069767, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71988159, Length=86, Percent_Identity=40.6976744186046, Blast_Score=85, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6325198, Length=104, Percent_Identity=51.9230769230769, Blast_Score=110, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=45.2380952380952, Blast_Score=84, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=44.047619047619, Blast_Score=82, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24642023, Length=88, Percent_Identity=48.8636363636364, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19921242, Length=97, Percent_Identity=40.2061855670103, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11583; Mature: 11583

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQQRIKQIVDENQVVLFMKGNAQFPMCGFSGRAIQVLKACGVDQFKTVNVLEDDEIRQ
CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHH
GIKAFSNWPTIPQLYVKGEFIGGSDIMMEMYQSGELQQLFAAA
HHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MDTQQRIKQIVDENQVVLFMKGNAQFPMCGFSGRAIQVLKACGVDQFKTVNVLEDDEIRQ
CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHH
GIKAFSNWPTIPQLYVKGEFIGGSDIMMEMYQSGELQQLFAAA
HHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]