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The map label for this gene is 78064980

Identifier: 78064980

GI number: 78064980

Start: 371051

End: 371629

Strand: Direct

Name: 78064980

Synonym: Bcep18194_A3503

Alternate gene names: NA

Gene position: 371051-371629 (Clockwise)

Preceding gene: 78064979

Following gene: 78064985

Centisome position: 10.04

GC content: 72.54

Gene sequence:

>579_bases
ATGAACGGCGACCGGCTGCGCGTGTTCGTCGCGCTGATGCCCGACGCGGTATCGCGCGACGCGCTGCACGCGTTGCCGGT
GACCCGCGGCGCGCGGCGTCCGCTGCCCGCGCAACTGCATGTGACGCTCGCGTTCGTCGGTGCGATCGAGCGGGTGTGCT
GCGATGAGCTGGCCGCGTGCCTGCCGGCGCTCGCGGCCGCGCATGCATTGCCGTTGATGCCGGTCGAACGGATCGCGTGG
TGGCCGAGCCTGCCGCGCGCGCGGCTGATCGTCGCGGAACTGGCCGCCGAGCCGGCGTGTGCGGCGTTGAATGCTGCGCT
GTCGACGAAGCTGCGCGAGCTCGGCGTGCCGGCTGACCGGCGGCCGTTCCGCCCGCATGTGACGCTCGCGCGGCTGCCGC
ACGATGCGGTCGGGCAGCCGGCGCACGGCGGCGCGGTGAAGCGGCCGGTTGCGCTGCGCTTCGATGCGCTTACGTTGTTC
GAAAGCCGGTTGTCGCATGAAGGCGTGTCGCATCGGCCGATCGTGTCGGCGCCGATCGCGCGGGCAGATGGTGACGCGGA
TGGTCCGGCGGAGCAGTGA

Upstream 100 bases:

>100_bases
ACGTGCTGCCGACCGACGTGTGGGGCGAGCATGGCCCGCTGCCGCAACGTCCGGCCGCGACTGATCCGGCGCGCGTGCCG
CGCGCGGTGGCGAGCGAGTC

Downstream 100 bases:

>100_bases
GCGGCTTGCAAGCGGCGTTGCGATTGCCGGGCGTCATGTGTATTGCGTCGGCGCATCGCATCGCGTCGCCGGTATCGTCC
GGCCTACCGGGCCTACCGGG

Product: 2',5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNGDRLRVFVALMPDAVSRDALHALPVTRGARRPLPAQLHVTLAFVGAIERVCCDELAACLPALAAAHALPLMPVERIAW
WPSLPRARLIVAELAAEPACAALNAALSTKLRELGVPADRRPFRPHVTLARLPHDAVGQPAHGGAVKRPVALRFDALTLF
ESRLSHEGVSHRPIVSAPIARADGDADGPAEQ

Sequences:

>Translated_192_residues
MNGDRLRVFVALMPDAVSRDALHALPVTRGARRPLPAQLHVTLAFVGAIERVCCDELAACLPALAAAHALPLMPVERIAW
WPSLPRARLIVAELAAEPACAALNAALSTKLRELGVPADRRPFRPHVTLARLPHDAVGQPAHGGAVKRPVALRFDALTLF
ESRLSHEGVSHRPIVSAPIARADGDADGPAEQ
>Mature_192_residues
MNGDRLRVFVALMPDAVSRDALHALPVTRGARRPLPAQLHVTLAFVGAIERVCCDELAACLPALAAAHALPLMPVERIAW
WPSLPRARLIVAELAAEPACAALNAALSTKLRELGVPADRRPFRPHVTLARLPHDAVGQPAHGGAVKRPVALRFDALTLF
ESRLSHEGVSHRPIVSAPIARADGDADGPAEQ

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20477; Mature: 20477

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGDRLRVFVALMPDAVSRDALHALPVTRGARRPLPAQLHVTLAFVGAIERVCCDELAAC
CCCCEEEEEEEECCCHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPALAAAHALPLMPVERIAWWPSLPRARLIVAELAAEPACAALNAALSTKLRELGVPADR
HHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
RPFRPHVTLARLPHDAVGQPAHGGAVKRPVALRFDALTLFESRLSHEGVSHRPIVSAPIA
CCCCCCEEHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RADGDADGPAEQ
CCCCCCCCCCCC
>Mature Secondary Structure
MNGDRLRVFVALMPDAVSRDALHALPVTRGARRPLPAQLHVTLAFVGAIERVCCDELAAC
CCCCEEEEEEEECCCHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPALAAAHALPLMPVERIAWWPSLPRARLIVAELAAEPACAALNAALSTKLRELGVPADR
HHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
RPFRPHVTLARLPHDAVGQPAHGGAVKRPVALRFDALTLFESRLSHEGVSHRPIVSAPIA
CCCCCCEEHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RADGDADGPAEQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA