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The map label for this gene is yaaJ [C]

Identifier: 78064979

GI number: 78064979

Start: 369564

End: 371054

Strand: Direct

Name: yaaJ [C]

Synonym: Bcep18194_A3502

Alternate gene names: 78064979

Gene position: 369564-371054 (Clockwise)

Preceding gene: 78064978

Following gene: 78064980

Centisome position: 10.0

GC content: 67.81

Gene sequence:

>1491_bases
ATGGAAGCACTCGTGCAAGGGCTGATCGACGCCGTCAACGGCGTGTTGTGGAACTACGTGCTGATCGCGCTGCTGCTCGG
CGTGGGCGTGTGGTTCACGCTGCGGTTCCGGATGATCCAGTTGAAGGCGCTATTCCTCAGCGTGAAGCTGGTCGGCAGCA
AGGGCGAGCCGGGCAGCATCTCGTCGTTCCAGGCGTTCGCGACCGGGCTCGCGAGCCGCGTCGGCACCGGCAACATCGCC
GGCGTCGCGGTTGCGCTGACGGTCGGCGGGCCGGGTGCGATCTTCTGGATGTGGATGACGGCGCTGGTCGGGATGTCGTC
CGCGTTCGTCGAGGCGACGCTCGCGCAGATATTCAAGGTGTCGCACCCGGACGGCAGCTATCGCGGCGGCCCGGCGTACT
ACATCCAGACGGGCCTGCGCTCGCGCGGCTTCGGCGTGCTGTTCTCGCTGTCGCTGATCCTCGCGTTCGGCTTCGTGTTC
AATGCGGTGCAGGCCAATGCGATCGCCGATGCGTTCGACACGTCGTTCGGCTGGAGCCGCGCGACGGTCGGTCTCGGGCT
CGTGCTGCTGACCGCGCCGATCATCTTCGGCGGGATTCGCCGGATCGCGGCGGTTGCGCAGGTGATCGTGCCGCTGATGG
CAATCGGTTACCTCGCGCTCGCCGTCTATGCGGTCGCGACGCATATCGCGCTGGTGCCGGGCGTGATCGCGCTGATCGTG
AAGAGCGCGTTCGGTCTCGAACAGGCGGCGGGTGGCCTGACGGGCTATGCGGTCAGCCAGGCAGTCGCGATGGGCGTGAA
GCGCGGGCTGTTCTCGAACGAGGCCGGTATGGGCAGCGCGCCGAACGCGGCGGCGACCGCCAGCACGCGGCATCCGGTCG
TGCAGGGGCTGATCCAGATGCTCGGCGTGTTCGTCGACACGGTCGTGATCTGCAGCGCGACCGCCTTCGTGATCCTGCTG
TCGGGCCAGTACGAGCTGGGCACCGGCATGGAAGGCGCGGCGCTCACGCAGCGCTCGATCGCGAGCCACGTCGGCGACTG
GGGCGGCATCTACATGGCGTTTGCGATCTTCTTCTTCGCGTACTCGTCGGTGATCGGCAACTACGCGTACGCGGAAGGCA
ACGTCGAATTCATCACGAAGCGGCGCGGCGTGCTGCCGCTGTTCCGTGTCGCGGTGCTCGCGATGGTGATGTTCGGCAGC
GTCGGGCAACTGCCGCTCGTGTGGGCGATGGCCGATACGAGCATGGGGCTGATGGCGATCATCAACCTGATCGCGATCCT
CGCGCTCGGCAAGTACGCGCACGCGGCCTGGCGCGACTATCGCCGCCAGCGCGCGGAAGGCGTGGCCGATCCGGTGTTCA
CGCGCAACACGATTCCGGAGCTCGCGAACGTGCTGCCGACCGACGTGTGGGGCGAGCATGGCCCGCTGCCGCAACGTCCG
GCCGCGACTGATCCGGCGCGCGTGCCGCGCGCGGTGGCGAGCGAGTCATGA

Upstream 100 bases:

>100_bases
GTTTTGTAATGATCCTTGCAAATTGTCATATCATGTCGCCCCTCCGGCCGTGAAACGAGCGGCCATCACATGTGACTGAC
CCTATTTACAAGGATTCTGG

Downstream 100 bases:

>100_bases
ACGGCGACCGGCTGCGCGTGTTCGTCGCGCTGATGCCCGACGCGGTATCGCGCGACGCGCTGCACGCGTTGCCGGTGACC
CGCGGCGCGCGGCGTCCGCT

Product: Sodium/alanine symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MEALVQGLIDAVNGVLWNYVLIALLLGVGVWFTLRFRMIQLKALFLSVKLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHPDGSYRGGPAYYIQTGLRSRGFGVLFSLSLILAFGFVF
NAVQANAIADAFDTSFGWSRATVGLGLVLLTAPIIFGGIRRIAAVAQVIVPLMAIGYLALAVYAVATHIALVPGVIALIV
KSAFGLEQAAGGLTGYAVSQAVAMGVKRGLFSNEAGMGSAPNAAATASTRHPVVQGLIQMLGVFVDTVVICSATAFVILL
SGQYELGTGMEGAALTQRSIASHVGDWGGIYMAFAIFFFAYSSVIGNYAYAEGNVEFITKRRGVLPLFRVAVLAMVMFGS
VGQLPLVWAMADTSMGLMAIINLIAILALGKYAHAAWRDYRRQRAEGVADPVFTRNTIPELANVLPTDVWGEHGPLPQRP
AATDPARVPRAVASES

Sequences:

>Translated_496_residues
MEALVQGLIDAVNGVLWNYVLIALLLGVGVWFTLRFRMIQLKALFLSVKLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHPDGSYRGGPAYYIQTGLRSRGFGVLFSLSLILAFGFVF
NAVQANAIADAFDTSFGWSRATVGLGLVLLTAPIIFGGIRRIAAVAQVIVPLMAIGYLALAVYAVATHIALVPGVIALIV
KSAFGLEQAAGGLTGYAVSQAVAMGVKRGLFSNEAGMGSAPNAAATASTRHPVVQGLIQMLGVFVDTVVICSATAFVILL
SGQYELGTGMEGAALTQRSIASHVGDWGGIYMAFAIFFFAYSSVIGNYAYAEGNVEFITKRRGVLPLFRVAVLAMVMFGS
VGQLPLVWAMADTSMGLMAIINLIAILALGKYAHAAWRDYRRQRAEGVADPVFTRNTIPELANVLPTDVWGEHGPLPQRP
AATDPARVPRAVASES
>Mature_496_residues
MEALVQGLIDAVNGVLWNYVLIALLLGVGVWFTLRFRMIQLKALFLSVKLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHPDGSYRGGPAYYIQTGLRSRGFGVLFSLSLILAFGFVF
NAVQANAIADAFDTSFGWSRATVGLGLVLLTAPIIFGGIRRIAAVAQVIVPLMAIGYLALAVYAVATHIALVPGVIALIV
KSAFGLEQAAGGLTGYAVSQAVAMGVKRGLFSNEAGMGSAPNAAATASTRHPVVQGLIQMLGVFVDTVVICSATAFVILL
SGQYELGTGMEGAALTQRSIASHVGDWGGIYMAFAIFFFAYSSVIGNYAYAEGNVEFITKRRGVLPLFRVAVLAMVMFGS
VGQLPLVWAMADTSMGLMAIINLIAILALGKYAHAAWRDYRRQRAEGVADPVFTRNTIPELANVLPTDVWGEHGPLPQRP
AATDPARVPRAVASES

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=466, Percent_Identity=42.274678111588, Blast_Score=351, Evalue=7e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 52092; Mature: 52092

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALVQGLIDAVNGVLWNYVLIALLLGVGVWFTLRFRMIQLKALFLSVKLVGSKGEPGSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
SSFQAFATGLASRVGTGNIAGVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKV
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
SHPDGSYRGGPAYYIQTGLRSRGFGVLFSLSLILAFGFVFNAVQANAIADAFDTSFGWSR
CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ATVGLGLVLLTAPIIFGGIRRIAAVAQVIVPLMAIGYLALAVYAVATHIALVPGVIALIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSAFGLEQAAGGLTGYAVSQAVAMGVKRGLFSNEAGMGSAPNAAATASTRHPVVQGLIQM
HHHHCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LGVFVDTVVICSATAFVILLSGQYELGTGMEGAALTQRSIASHVGDWGGIYMAFAIFFFA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YSSVIGNYAYAEGNVEFITKRRGVLPLFRVAVLAMVMFGSVGQLPLVWAMADTSMGLMAI
HHHHHCCCCCCCCCHHEEHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH
INLIAILALGKYAHAAWRDYRRQRAEGVADPVFTRNTIPELANVLPTDVWGEHGPLPQRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
AATDPARVPRAVASES
CCCCHHHCCHHHCCCC
>Mature Secondary Structure
MEALVQGLIDAVNGVLWNYVLIALLLGVGVWFTLRFRMIQLKALFLSVKLVGSKGEPGSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
SSFQAFATGLASRVGTGNIAGVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKV
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
SHPDGSYRGGPAYYIQTGLRSRGFGVLFSLSLILAFGFVFNAVQANAIADAFDTSFGWSR
CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ATVGLGLVLLTAPIIFGGIRRIAAVAQVIVPLMAIGYLALAVYAVATHIALVPGVIALIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSAFGLEQAAGGLTGYAVSQAVAMGVKRGLFSNEAGMGSAPNAAATASTRHPVVQGLIQM
HHHHCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LGVFVDTVVICSATAFVILLSGQYELGTGMEGAALTQRSIASHVGDWGGIYMAFAIFFFA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YSSVIGNYAYAEGNVEFITKRRGVLPLFRVAVLAMVMFGSVGQLPLVWAMADTSMGLMAI
HHHHHCCCCCCCCCHHEEHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH
INLIAILALGKYAHAAWRDYRRQRAEGVADPVFTRNTIPELANVLPTDVWGEHGPLPQRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
AATDPARVPRAVASES
CCCCHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]