| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is gudP [H]
Identifier: 78064874
GI number: 78064874
Start: 254847
End: 256187
Strand: Reverse
Name: gudP [H]
Synonym: Bcep18194_A3397
Alternate gene names: 78064874
Gene position: 256187-254847 (Counterclockwise)
Preceding gene: 78064877
Following gene: 78064873
Centisome position: 6.93
GC content: 67.79
Gene sequence:
>1341_bases ATGAATCCGCTTCAAGCGCTGCCGGCGTCCGCGTCGGCAACGGCCCGGCGCACCCGCGTGCGCTGGCTGGTGCTGGCCGT CCTGTTCGCGGTCACGACGATCAACTACGCGGATCGCGCGGCGATCGCGATCGCGGGCCCCAGCCTCGCCCGCGCGCTGC ACCTGAGCCACGTGCAGATCGGCTTCATCTTCTCCGCGTTCGGCTGGTCGTACGTGGTCGCGCAACTGCCGGGCGGCTGG CTGCTCGACCGCTACGGGTCGCGCATCGTCTATGCGTTCAGCATCTTCTTCTGGTCGCTGTTCACGCTGCTGCAGGGCTC GATCGGCTTCTTCGGCGGCGCGGCCGCGTTCGCGCTGCTGTTCGGGCTGCGCTTCCTCGTCGGCGCGGCCGAAGCGCCGT CGTTCCCGGCCAACAGCCGGATCGTGTCCGCGTGGTTCCCGGCCGCCGAACGCGGCACCGCGTCGGCGATCTTCAACGCC GCGCAGTACGCGGCGACCGTCGTGTTCGCGCCGCTGATGGGCTGGCTCGTGCACGCGTTCGGCTGGCAATCCGTGTTCGC GGTGATGGGCGTGCTCGGCTTCGCGTTCGTCCTGGTGTGGAACCGCACGATGTACGACCCGAAGGACCATCCGAACATCA ACCGCGCGGAACTCGACTACCTCGCCGAAGGCGGCGCGCTCGTCAACATCGACCAGGCGACGGGCGGACGCGACGGCGGC CCGTCGATGCGCCACGTGAAGGCACTGCTGAAGAGCCGGATGCTGATCGGCGTATACGTCGCGCAGTACTGCATCAACGC GCTCACCTATTTCTTCATCACGTGGTTTCCCGTCTATCTCGTGCAGGCGCGCGGGATGTCGATCCTCAACGCGGGCCTCG TCGCGTCGATCCCGGCCGTGTGCGGGTTCCTCGGCGGGATTCTCGGCGGCGTCGTGTCCGACGGGCTGCTCAAGCAGGGC CGCTCGCTGTCGGTCGCGCGCAAGGTGCCGATCGTGTTCGGCATGCTGCTGTCGATGTCGATGATCGTCTGCAACTACAC CGATTCGCACGTACTCGTCGTGCTGTTCATGGCGCTGTCGTTCTTCGGCAAGGGGCTCGGCGCGCTCGGCTGGGCCGTCA ACGCCGACACCGCGCCGCGCCAGATCGCGGGCCTGAGCGGCGCGCTGCTCAACACGTGCGGCAACCTCTCCAGCATCACG ACGCCGATCGCGATCGGCTACATCGTCGACCGCAGCGGCTCGTTCAACGGCGCGCTGGTCTATGTGGTCGCGCACGCGCT CGTCGCCGTGATCTGCTACCTGTTCGTCGTCGGCGAGATCCGCCGCGTCGAGCTTCAATGA
Upstream 100 bases:
>100_bases GCAACGGTGTCCGGCCTCCGGCCGGCAGCACCCACACGAATGGCGCGCACCGACGCGCCTGCCGCACGACGGCACCTTCC GCCCTTCGGAGGAGACAGTC
Downstream 100 bases:
>100_bases ACGGCGCGGGCCGCACCGGCGCAGCCGGCGGCCCGTGCATCACCGGAACCAGGAGCGAACCGATGTCCGAATCCCGCCGT GACGGCACCCCGCGCGTCAC
Product: D-galactonate transporter
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MNPLQALPASASATARRTRVRWLVLAVLFAVTTINYADRAAIAIAGPSLARALHLSHVQIGFIFSAFGWSYVVAQLPGGW LLDRYGSRIVYAFSIFFWSLFTLLQGSIGFFGGAAAFALLFGLRFLVGAAEAPSFPANSRIVSAWFPAAERGTASAIFNA AQYAATVVFAPLMGWLVHAFGWQSVFAVMGVLGFAFVLVWNRTMYDPKDHPNINRAELDYLAEGGALVNIDQATGGRDGG PSMRHVKALLKSRMLIGVYVAQYCINALTYFFITWFPVYLVQARGMSILNAGLVASIPAVCGFLGGILGGVVSDGLLKQG RSLSVARKVPIVFGMLLSMSMIVCNYTDSHVLVVLFMALSFFGKGLGALGWAVNADTAPRQIAGLSGALLNTCGNLSSIT TPIAIGYIVDRSGSFNGALVYVVAHALVAVICYLFVVGEIRRVELQ
Sequences:
>Translated_446_residues MNPLQALPASASATARRTRVRWLVLAVLFAVTTINYADRAAIAIAGPSLARALHLSHVQIGFIFSAFGWSYVVAQLPGGW LLDRYGSRIVYAFSIFFWSLFTLLQGSIGFFGGAAAFALLFGLRFLVGAAEAPSFPANSRIVSAWFPAAERGTASAIFNA AQYAATVVFAPLMGWLVHAFGWQSVFAVMGVLGFAFVLVWNRTMYDPKDHPNINRAELDYLAEGGALVNIDQATGGRDGG PSMRHVKALLKSRMLIGVYVAQYCINALTYFFITWFPVYLVQARGMSILNAGLVASIPAVCGFLGGILGGVVSDGLLKQG RSLSVARKVPIVFGMLLSMSMIVCNYTDSHVLVVLFMALSFFGKGLGALGWAVNADTAPRQIAGLSGALLNTCGNLSSIT TPIAIGYIVDRSGSFNGALVYVVAHALVAVICYLFVVGEIRRVELQ >Mature_446_residues MNPLQALPASASATARRTRVRWLVLAVLFAVTTINYADRAAIAIAGPSLARALHLSHVQIGFIFSAFGWSYVVAQLPGGW LLDRYGSRIVYAFSIFFWSLFTLLQGSIGFFGGAAAFALLFGLRFLVGAAEAPSFPANSRIVSAWFPAAERGTASAIFNA AQYAATVVFAPLMGWLVHAFGWQSVFAVMGVLGFAFVLVWNRTMYDPKDHPNINRAELDYLAEGGALVNIDQATGGRDGG PSMRHVKALLKSRMLIGVYVAQYCINALTYFFITWFPVYLVQARGMSILNAGLVASIPAVCGFLGGILGGVVSDGLLKQG RSLSVARKVPIVFGMLLSMSMIVCNYTDSHVLVVLFMALSFFGKGLGALGWAVNADTAPRQIAGLSGALLNTCGNLSSIT TPIAIGYIVDRSGSFNGALVYVVAHALVAVICYLFVVGEIRRVELQ
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9945322, Length=373, Percent_Identity=27.8820375335121, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI9966811, Length=394, Percent_Identity=28.4263959390863, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI21322234, Length=396, Percent_Identity=26.5151515151515, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI6912666, Length=401, Percent_Identity=25.9351620947631, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4885441, Length=385, Percent_Identity=25.7142857142857, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI148743791, Length=363, Percent_Identity=24.5179063360882, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI154350196, Length=419, Percent_Identity=24.1050119331742, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI223718438, Length=178, Percent_Identity=30.3370786516854, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI148728191, Length=304, Percent_Identity=24.3421052631579, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI5031955, Length=261, Percent_Identity=22.9885057471264, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI256219598, Length=389, Percent_Identity=22.879177377892, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4503847, Length=389, Percent_Identity=22.879177377892, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI256219483, Length=389, Percent_Identity=22.879177377892, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789152, Length=445, Percent_Identity=59.5505617977528, Blast_Score=559, Evalue=1e-160, Organism=Escherichia coli, GI1789515, Length=439, Percent_Identity=55.3530751708428, Blast_Score=527, Evalue=1e-151, Organism=Escherichia coli, GI87082320, Length=437, Percent_Identity=37.7574370709382, Blast_Score=328, Evalue=4e-91, Organism=Escherichia coli, GI2367379, Length=429, Percent_Identity=29.8368298368298, Blast_Score=181, Evalue=7e-47, Organism=Escherichia coli, GI2367193, Length=401, Percent_Identity=25.9351620947631, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1788573, Length=452, Percent_Identity=21.6814159292035, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533556, Length=383, Percent_Identity=29.7650130548303, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI115533554, Length=383, Percent_Identity=29.7650130548303, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17552542, Length=394, Percent_Identity=26.6497461928934, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17535049, Length=436, Percent_Identity=21.7889908256881, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560030, Length=396, Percent_Identity=23.7373737373737, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17569727, Length=305, Percent_Identity=24.9180327868852, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71997452, Length=351, Percent_Identity=24.7863247863248, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI193205400, Length=282, Percent_Identity=22.3404255319149, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32565914, Length=405, Percent_Identity=22.962962962963, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI32565916, Length=285, Percent_Identity=24.5614035087719, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17554148, Length=339, Percent_Identity=23.598820058997, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25141316, Length=366, Percent_Identity=23.4972677595628, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25141318, Length=366, Percent_Identity=23.4972677595628, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25141341, Length=302, Percent_Identity=23.841059602649, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI86561091, Length=276, Percent_Identity=24.6376811594203, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17532009, Length=365, Percent_Identity=21.6438356164384, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71991448, Length=332, Percent_Identity=22.8915662650602, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71991453, Length=332, Percent_Identity=22.8915662650602, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17566884, Length=324, Percent_Identity=23.1481481481481, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI24583789, Length=442, Percent_Identity=27.1493212669683, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24584153, Length=398, Percent_Identity=26.6331658291457, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI24641682, Length=377, Percent_Identity=26.525198938992, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24654215, Length=394, Percent_Identity=28.9340101522843, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI19922400, Length=394, Percent_Identity=28.9340101522843, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI28573708, Length=408, Percent_Identity=26.9607843137255, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI28573707, Length=408, Percent_Identity=26.9607843137255, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24639764, Length=449, Percent_Identity=24.4988864142539, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24648416, Length=388, Percent_Identity=24.7422680412371, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI21356189, Length=388, Percent_Identity=24.7422680412371, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI62484226, Length=408, Percent_Identity=26.4705882352941, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45550460, Length=399, Percent_Identity=26.5664160401003, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24655255, Length=362, Percent_Identity=27.3480662983425, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI24655271, Length=414, Percent_Identity=23.1884057971014, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI20130135, Length=414, Percent_Identity=23.6714975845411, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24580790, Length=357, Percent_Identity=25.7703081232493, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI28573299, Length=451, Percent_Identity=23.7250554323725, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI20130167, Length=405, Percent_Identity=22.962962962963, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24658658, Length=397, Percent_Identity=24.9370277078086, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI20129235, Length=364, Percent_Identity=24.7252747252747, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI19920686, Length=412, Percent_Identity=22.8155339805825, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24658666, Length=375, Percent_Identity=23.7333333333333, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI221474708, Length=284, Percent_Identity=27.8169014084507, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24653727, Length=323, Percent_Identity=23.2198142414861, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24658674, Length=380, Percent_Identity=22.8947368421053, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47706; Mature: 47706
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLQALPASASATARRTRVRWLVLAVLFAVTTINYADRAAIAIAGPSLARALHLSHVQI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH GFIFSAFGWSYVVAQLPGGWLLDRYGSRIVYAFSIFFWSLFTLLQGSIGFFGGAAAFALL HHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FGLRFLVGAAEAPSFPANSRIVSAWFPAAERGTASAIFNAAQYAATVVFAPLMGWLVHAF HHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWQSVFAVMGVLGFAFVLVWNRTMYDPKDHPNINRAELDYLAEGGALVNIDQATGGRDGG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCC PSMRHVKALLKSRMLIGVYVAQYCINALTYFFITWFPVYLVQARGMSILNAGLVASIPAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CGFLGGILGGVVSDGLLKQGRSLSVARKVPIVFGMLLSMSMIVCNYTDSHVLVVLFMALS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FFGKGLGALGWAVNADTAPRQIAGLSGALLNTCGNLSSITTPIAIGYIVDRSGSFNGALV HHHCCHHHHCCEECCCCCCHHHHCCCHHHHHHCCCCHHHCCHHEEEEEEECCCCCCCHHH YVVAHALVAVICYLFVVGEIRRVELQ HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPLQALPASASATARRTRVRWLVLAVLFAVTTINYADRAAIAIAGPSLARALHLSHVQI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH GFIFSAFGWSYVVAQLPGGWLLDRYGSRIVYAFSIFFWSLFTLLQGSIGFFGGAAAFALL HHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FGLRFLVGAAEAPSFPANSRIVSAWFPAAERGTASAIFNAAQYAATVVFAPLMGWLVHAF HHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWQSVFAVMGVLGFAFVLVWNRTMYDPKDHPNINRAELDYLAEGGALVNIDQATGGRDGG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCC PSMRHVKALLKSRMLIGVYVAQYCINALTYFFITWFPVYLVQARGMSILNAGLVASIPAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CGFLGGILGGVVSDGLLKQGRSLSVARKVPIVFGMLLSMSMIVCNYTDSHVLVVLFMALS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FFGKGLGALGWAVNADTAPRQIAGLSGALLNTCGNLSSITTPIAIGYIVDRSGSFNGALV HHHCCHHHHCCEECCCCCCHHHHCCCHHHHHHCCCCHHHCCHHEEEEEEECCCCCCCHHH YVVAHALVAVICYLFVVGEIRRVELQ HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7704254; 9384377 [H]