Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78064872

Identifier: 78064872

GI number: 78064872

Start: 252949

End: 253260

Strand: Reverse

Name: 78064872

Synonym: Bcep18194_A3395

Alternate gene names: NA

Gene position: 253260-252949 (Counterclockwise)

Preceding gene: 78064873

Following gene: 78064867

Centisome position: 6.86

GC content: 61.86

Gene sequence:

>312_bases
ATGACGTCTCCCGATTCGACACCGCGACAGATCATCGTCCTCATCCTGTATTCGGTGCTGAGCCTGCCCGCGAGCATGAG
CGTCGCCGGTTATGTCGCGACCCTGATCACGCGGAACGTGTCGAACTTCGAAGGCGGTGCCGGCTACGCGGCGCTCTGGT
GGATCATCCTGCTGACCTGCGCGTTCTCCGTGCTGTCGATCGTCATCGCCGTGCTGCTGCGGAAAAGAACGGCGATTCTC
GTGGTCATCACGGTGGCGTTTGCCGCGCTGTCGGTGCCGACGTTCAAGCTCGCGCACGAACTACTGACCTGA

Upstream 100 bases:

>100_bases
TTGCCAAACGCGGAAAACGCCCGCATCCTGCCGGCTGCCTGAATCGGCCTGCAAGGCGAACGGTTCGGCGGCCCGTCCAT
CCGAAAGAATAGCGCTCGCC

Downstream 100 bases:

>100_bases
CCAGCCACCAGCTATCCCGCTGCGTCAAACGCGGCGCGCGGGCACGGCCTGCCGTTGTGAACCCACAAAAACAAAAGGGC
CCGATCTCGCGATCGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTSPDSTPRQIIVLILYSVLSLPASMSVAGYVATLITRNVSNFEGGAGYAALWWIILLTCAFSVLSIVIAVLLRKRTAIL
VVITVAFAALSVPTFKLAHELLT

Sequences:

>Translated_103_residues
MTSPDSTPRQIIVLILYSVLSLPASMSVAGYVATLITRNVSNFEGGAGYAALWWIILLTCAFSVLSIVIAVLLRKRTAIL
VVITVAFAALSVPTFKLAHELLT
>Mature_102_residues
TSPDSTPRQIIVLILYSVLSLPASMSVAGYVATLITRNVSNFEGGAGYAALWWIILLTCAFSVLSIVIAVLLRKRTAILV
VITVAFAALSVPTFKLAHELLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11035; Mature: 10904

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPDSTPRQIIVLILYSVLSLPASMSVAGYVATLITRNVSNFEGGAGYAALWWIILLTC
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFSVLSIVIAVLLRKRTAILVVITVAFAALSVPTFKLAHELLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
>Mature Secondary Structure 
TSPDSTPRQIIVLILYSVLSLPASMSVAGYVATLITRNVSNFEGGAGYAALWWIILLTC
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFSVLSIVIAVLLRKRTAILVVITVAFAALSVPTFKLAHELLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA