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The map label for this gene is ycbL [H]

Identifier: 78064865

GI number: 78064865

Start: 247435

End: 248160

Strand: Reverse

Name: ycbL [H]

Synonym: Bcep18194_A3388

Alternate gene names: 78064865

Gene position: 248160-247435 (Counterclockwise)

Preceding gene: 78064867

Following gene: 78064864

Centisome position: 6.72

GC content: 66.39

Gene sequence:

>726_bases
ATGCACCGCGACGCGCGTCGGGCGACCGGCAGGCAGCACGCGCGACCGGTACAATCGCTCCTTTTAGCCGCCGGTGCCTC
CATGAAAGTCACGCTCATTCCGGTCACGCCGTTCCAGCAGAACTGCTCGCTGCTCGTCTGCGAGAAGACGGGCCGCGCCG
CCGTCGTCGATCCGGGCGGCGATCTCGACCGGATCGAACAGGAAGTCGCGCGGCAGAACGTGCAAGTCGAGAAGGTGCTG
CTCACGCACGGGCACATCGATCACTGCGCGGGCGCGAAGACGCTCGCGACGCATTACGGCGTGCCGATCGAGGGGCCTCA
GGAAGAAGAGCGCTTCTGGATCGAGAAGCTGCCGATGCAAAGCGAACGCTTCGGCTTTCCGGCCGCCGAAACCTTCGAGC
CGGATCACTGGCTGAGCGACGGCGACACCGTGCAGTTCGGCGACGAGACGCTCGAGGTCTATCACTGCCCGGGCCACACG
CCCGGCCACGTCGTGTTCTTCAGCCGCGCGCATCGCGTCGCGATCGTCGGCGACGTGCTGTTCGCCGGCTCGATCGGCCG
TACCGATTTCCCGCGCGGCAATCACGAGGATCTCGTCCGGTCGATCAAGGAGAAGCTGTGGCCGCTCGGCGACGACGTGA
CGTTCGTGCCGGGCCACGGCCCGGTGTCGACGTTCGGCGACGAGCGCCGCACGAACCCGTTCGTGTCCGATAAGGTATTC
GGATGA

Upstream 100 bases:

>100_bases
TATACATAAACCAAAAGGTCAACCCGAAAAGCACCCCCTGCGGACCATTGATTCTCACTATGGCCGTAACAATCGACATG
CTCCGGGAATGCCCGGACGC

Downstream 100 bases:

>100_bases
ACCAGACCGCCATCCCGGAAATCTACGTCAGCACCGATGTCGAGGCCGACGGCCCGATTCCTGGCCCGCACTCGATGCTG
AGCTTCGCGTCGGCGGCCTA

Product: Beta-lactamase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MHRDARRATGRQHARPVQSLLLAAGASMKVTLIPVTPFQQNCSLLVCEKTGRAAVVDPGGDLDRIEQEVARQNVQVEKVL
LTHGHIDHCAGAKTLATHYGVPIEGPQEEERFWIEKLPMQSERFGFPAAETFEPDHWLSDGDTVQFGDETLEVYHCPGHT
PGHVVFFSRAHRVAIVGDVLFAGSIGRTDFPRGNHEDLVRSIKEKLWPLGDDVTFVPGHGPVSTFGDERRTNPFVSDKVF
G

Sequences:

>Translated_241_residues
MHRDARRATGRQHARPVQSLLLAAGASMKVTLIPVTPFQQNCSLLVCEKTGRAAVVDPGGDLDRIEQEVARQNVQVEKVL
LTHGHIDHCAGAKTLATHYGVPIEGPQEEERFWIEKLPMQSERFGFPAAETFEPDHWLSDGDTVQFGDETLEVYHCPGHT
PGHVVFFSRAHRVAIVGDVLFAGSIGRTDFPRGNHEDLVRSIKEKLWPLGDDVTFVPGHGPVSTFGDERRTNPFVSDKVF
G
>Mature_241_residues
MHRDARRATGRQHARPVQSLLLAAGASMKVTLIPVTPFQQNCSLLVCEKTGRAAVVDPGGDLDRIEQEVARQNVQVEKVL
LTHGHIDHCAGAKTLATHYGVPIEGPQEEERFWIEKLPMQSERFGFPAAETFEPDHWLSDGDTVQFGDETLEVYHCPGHT
PGHVVFFSRAHRVAIVGDVLFAGSIGRTDFPRGNHEDLVRSIKEKLWPLGDDVTFVPGHGPVSTFGDERRTNPFVSDKVF
G

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=105, Percent_Identity=40, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1787158, Length=212, Percent_Identity=55.6603773584906, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI1786406, Length=193, Percent_Identity=30.5699481865285, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17538952, Length=195, Percent_Identity=31.2820512820513, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI221330176, Length=202, Percent_Identity=26.7326732673267, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 26677; Mature: 26677

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRDARRATGRQHARPVQSLLLAAGASMKVTLIPVTPFQQNCSLLVCEKTGRAAVVDPGG
CCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCC
DLDRIEQEVARQNVQVEKVLLTHGHIDHCAGAKTLATHYGVPIEGPQEEERFWIEKLPMQ
CHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCC
SERFGFPAAETFEPDHWLSDGDTVQFGDETLEVYHCPGHTPGHVVFFSRAHRVAIVGDVL
HHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCEEEEEEHHH
FAGSIGRTDFPRGNHEDLVRSIKEKLWPLGDDVTFVPGHGPVSTFGDERRTNPFVSDKVF
HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
G
C
>Mature Secondary Structure
MHRDARRATGRQHARPVQSLLLAAGASMKVTLIPVTPFQQNCSLLVCEKTGRAAVVDPGG
CCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCC
DLDRIEQEVARQNVQVEKVLLTHGHIDHCAGAKTLATHYGVPIEGPQEEERFWIEKLPMQ
CHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCC
SERFGFPAAETFEPDHWLSDGDTVQFGDETLEVYHCPGHTPGHVVFFSRAHRVAIVGDVL
HHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCEEEEEEHHH
FAGSIGRTDFPRGNHEDLVRSIKEKLWPLGDDVTFVPGHGPVSTFGDERRTNPFVSDKVF
HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]