| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064864
Identifier: 78064864
GI number: 78064864
Start: 246779
End: 247438
Strand: Reverse
Name: 78064864
Synonym: Bcep18194_A3387
Alternate gene names: NA
Gene position: 247438-246779 (Counterclockwise)
Preceding gene: 78064865
Following gene: 78064863
Centisome position: 6.7
GC content: 66.06
Gene sequence:
>660_bases ATGAACCAGACCGCCATCCCGGAAATCTACGTCAGCACCGATGTCGAGGCCGACGGCCCGATTCCTGGCCCGCACTCGAT GCTGAGCTTCGCGTCGGCGGCCTACACCGAGGACAAGCAGCTGATCGCGACGTTCTCGGCCAACCTCGAAACGCTACCGG GCGCGCAGGCGCACCCCGTGCAGGAAGCGTGGTGGAAGACCGAGCCCGAAGCATGGGCCGCGTGCCGAAAGGATCTGCAA GCGCCCGAAGCGGCGCTGGTCGCATACGTCGACTGGGTCGAGGCGCTGCCCGGCAAGCCGGTGTTCGTCGCGATGCCGGC CGGCTTCGACTTCACGTTCATGTTCTGGTACATGATGCGCTTCGCCGGACGCTGCCCGTTCTCGTGGTCGGCGCTCGACA TCAAGACGCTCGCGTTCGCGATAACGGGCCTGCCGTACCGCAAGGCGATCAAGCCGCGTTTTCCGAAGCACTGGTTCGAC GACCATCCGCACACGCACGTCGCGCTGGATGACGCGATCGAGCAAGGCGCGCTGTTCTGCAACATGCTCGCCGACCTGCG CCGCCAGCAGGCCGCGCTCGCAGGCCTCGCAGTGTCGGACACCGATCGGTCGGACGACGCAGGCGCGGGACAAATCCCCA CGGATCCGCGAGCAAATTAG
Upstream 100 bases:
>100_bases CGCTCGGCGACGACGTGACGTTCGTGCCGGGCCACGGCCCGGTGTCGACGTTCGGCGACGAGCGCCGCACGAACCCGTTC GTGTCCGATAAGGTATTCGG
Downstream 100 bases:
>100_bases CGAATCTCGCTCAACAACGCGACGCCAGATTGCCTTTCCTTTCCCGGCCCTCTAACATTCAGCGTGTTGTAGTTGCCGCA TGGAGGCGCAGGTGACGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Exonuclease RNAse T And DNA Polymerase III
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNQTAIPEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKQLIATFSANLETLPGAQAHPVQEAWWKTEPEAWAACRKDLQ APEAALVAYVDWVEALPGKPVFVAMPAGFDFTFMFWYMMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKHWFD DHPHTHVALDDAIEQGALFCNMLADLRRQQAALAGLAVSDTDRSDDAGAGQIPTDPRAN
Sequences:
>Translated_219_residues MNQTAIPEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKQLIATFSANLETLPGAQAHPVQEAWWKTEPEAWAACRKDLQ APEAALVAYVDWVEALPGKPVFVAMPAGFDFTFMFWYMMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKHWFD DHPHTHVALDDAIEQGALFCNMLADLRRQQAALAGLAVSDTDRSDDAGAGQIPTDPRAN >Mature_219_residues MNQTAIPEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKQLIATFSANLETLPGAQAHPVQEAWWKTEPEAWAACRKDLQ APEAALVAYVDWVEALPGKPVFVAMPAGFDFTFMFWYMMRFAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKHWFD DHPHTHVALDDAIEQGALFCNMLADLRRQQAALAGLAVSDTDRSDDAGAGQIPTDPRAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24141; Mature: 24141
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTAIPEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKQLIATFSANLETLPGAQAHPV CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCCCCCCCH QEAWWKTEPEAWAACRKDLQAPEAALVAYVDWVEALPGKPVFVAMPAGFDFTFMFWYMMR HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH FAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKHWFDDHPHTHVALDDAIEQGALFC HHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH NMLADLRRQQAALAGLAVSDTDRSDDAGAGQIPTDPRAN HHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQTAIPEIYVSTDVEADGPIPGPHSMLSFASAAYTEDKQLIATFSANLETLPGAQAHPV CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCCCCCCCH QEAWWKTEPEAWAACRKDLQAPEAALVAYVDWVEALPGKPVFVAMPAGFDFTFMFWYMMR HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH FAGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKHWFDDHPHTHVALDDAIEQGALFC HHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH NMLADLRRQQAALAGLAVSDTDRSDDAGAGQIPTDPRAN HHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA