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The map label for this gene is fliD [H]

Identifier: 78064819

GI number: 78064819

Start: 197759

End: 199177

Strand: Reverse

Name: fliD [H]

Synonym: Bcep18194_A3342

Alternate gene names: 78064819

Gene position: 199177-197759 (Counterclockwise)

Preceding gene: 78064820

Following gene: 78064818

Centisome position: 5.39

GC content: 65.82

Gene sequence:

>1419_bases
ATGGCCACCACGACCCCCGTCAGCAGCACGGACATCACCACCCTCCTGTCGCAGGCCGGACAGTCGATCATCAGCGGTGC
GACCAATTCGTCGCTCGACGTCAATTCGCTCGTCACGACGCTGGTGAACGCGAAGACGGCCGGGCAATTGCAGACCCTGC
AGACCCGCCAGACGAACGACAATACGCAGCTGTCCGCGATCGGCCAACTGAAGGGTGCGCTGTCCGCGCTGCAGACCGCG
CTCACCGGCCTCTCGAACGGCACCACGCTCAGCAGCCTGGCCGCGACGGCGAGCGGCAGCGGCATCGCGACGACGGTCAC
GAGCGGCAGCGGTGCGGTGGCCGGTTCGTATTCAGTCAATGTCACGCAGCTCGCGACCGCCAACAAGCTGACGTCGGCCG
GCGTGACGTCGGCGGACACGATCTCGGCCGGCTCGCTGAGCATCACGTTCGGCAGCAACCCTGCGTTCAACGTCAACGTG
GCGGCCGGCGCGTCGCTGTCCGACATCGCGTCGTCGATCAACTCCGCGTCCGGCAATGCCGGCGTCACCGCATCGGTTAT
CACCGGTTCGGACGGCCAGCATCTCGTGATGCAATCGAACGCCACCGGCGCGGCCAACACGATCTCGATCACGGGCACGG
GCGTCAACTCGAAACTGACGTCGGGCTACACGACGGTCACCCCGGCCGCCGATGCGCAGCTGACGATCGACGGAACGCCG
GTGTCGAGTGCGTCGAACAACGTCTCGAGCGCGCTGACGGGCGTCAGCCTGGCGCTGTCGCAGGCCGCCGTCGGCACGAC
GCAAACCATCACGCTGTCGCAGGACACGGCCGCGGCGACGACCGCGATCAACAATTTCGCGACCGCGTATACCAACTTCG
TGAACACCGCGAAATCGCTGACGAGCTACGACCCGACGGCGCAAACCGCCGGCCCGCTGCTCGGCGACGCGATGATGAAC
ACGATCAGGAACACGCTCGCGACGACGCTCAGCAGCGGCGTCACGACGGGCGGCACGACCTATGCGCTCGGCAGCATCGG
CATCAACGTGGACTCGACCGGCGCGATGTCGGTCGACACCGCCGCGCTGACCACCGCGCTCAAGTCGAACAGTTCCGCGG
TGGCGGCGATCTTCAACCAGACGAACGGCATCGCCCAGGCGCTCAATGCGAACATCACCTCGTACACGCAGACGTCCGGC
CTGATCGACCAGCGCACCACCGCGATCAATGCCGATCTGACGAGCGTACAGGGTCAGGCCACGCAACTGCAGACCTACTC
GAGCCAGCTGACCACGCAATACACCGCGCAGTTCACCGCGCTGAACACGCTGATGGCGCAGATGGCGAACAACACCCGCT
ACCTGACCCAGCTGTTCGGCGGCCAGAACAGCTCCGGCGCGATGGCCAACAACAAGTAA

Upstream 100 bases:

>100_bases
GATCAGAATTTTCCAGGGAGGCACGCCTCCCTCTTTGCATTGAACCGCGGCACCCCGCCGCATCGCGCACGTTGATTGCG
CGGACGACCGGAGCAACGGC

Downstream 100 bases:

>100_bases
GCCTTGGCAACACCCCTTCGGAGCCGAACCATGACGAACGACACCCTGTCCCGCGCCTTCGACCTGACCCGTGCCATGCA
GTCGGCGGCCGACGCACGCG

Product: flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MATTTPVSSTDITTLLSQAGQSIISGATNSSLDVNSLVTTLVNAKTAGQLQTLQTRQTNDNTQLSAIGQLKGALSALQTA
LTGLSNGTTLSSLAATASGSGIATTVTSGSGAVAGSYSVNVTQLATANKLTSAGVTSADTISAGSLSITFGSNPAFNVNV
AAGASLSDIASSINSASGNAGVTASVITGSDGQHLVMQSNATGAANTISITGTGVNSKLTSGYTTVTPAADAQLTIDGTP
VSSASNNVSSALTGVSLALSQAAVGTTQTITLSQDTAAATTAINNFATAYTNFVNTAKSLTSYDPTAQTAGPLLGDAMMN
TIRNTLATTLSSGVTTGGTTYALGSIGINVDSTGAMSVDTAALTTALKSNSSAVAAIFNQTNGIAQALNANITSYTQTSG
LIDQRTTAINADLTSVQGQATQLQTYSSQLTTQYTAQFTALNTLMAQMANNTRYLTQLFGGQNSSGAMANNK

Sequences:

>Translated_472_residues
MATTTPVSSTDITTLLSQAGQSIISGATNSSLDVNSLVTTLVNAKTAGQLQTLQTRQTNDNTQLSAIGQLKGALSALQTA
LTGLSNGTTLSSLAATASGSGIATTVTSGSGAVAGSYSVNVTQLATANKLTSAGVTSADTISAGSLSITFGSNPAFNVNV
AAGASLSDIASSINSASGNAGVTASVITGSDGQHLVMQSNATGAANTISITGTGVNSKLTSGYTTVTPAADAQLTIDGTP
VSSASNNVSSALTGVSLALSQAAVGTTQTITLSQDTAAATTAINNFATAYTNFVNTAKSLTSYDPTAQTAGPLLGDAMMN
TIRNTLATTLSSGVTTGGTTYALGSIGINVDSTGAMSVDTAALTTALKSNSSAVAAIFNQTNGIAQALNANITSYTQTSG
LIDQRTTAINADLTSVQGQATQLQTYSSQLTTQYTAQFTALNTLMAQMANNTRYLTQLFGGQNSSGAMANNK
>Mature_471_residues
ATTTPVSSTDITTLLSQAGQSIISGATNSSLDVNSLVTTLVNAKTAGQLQTLQTRQTNDNTQLSAIGQLKGALSALQTAL
TGLSNGTTLSSLAATASGSGIATTVTSGSGAVAGSYSVNVTQLATANKLTSAGVTSADTISAGSLSITFGSNPAFNVNVA
AGASLSDIASSINSASGNAGVTASVITGSDGQHLVMQSNATGAANTISITGTGVNSKLTSGYTTVTPAADAQLTIDGTPV
SSASNNVSSALTGVSLALSQAAVGTTQTITLSQDTAAATTAINNFATAYTNFVNTAKSLTSYDPTAQTAGPLLGDAMMNT
IRNTLATTLSSGVTTGGTTYALGSIGINVDSTGAMSVDTAALTTALKSNSSAVAAIFNQTNGIAQALNANITSYTQTSGL
IDQRTTAINADLTSVQGQATQLQTYSSQLTTQYTAQFTALNTLMAQMANNTRYLTQLFGGQNSSGAMANNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=473, Percent_Identity=33.4038054968288, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46779; Mature: 46648

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTTPVSSTDITTLLSQAGQSIISGATNSSLDVNSLVTTLVNAKTAGQLQTLQTRQTND
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCC
NTQLSAIGQLKGALSALQTALTGLSNGTTLSSLAATASGSGIATTVTSGSGAVAGSYSVN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEECCEEEE
VTQLATANKLTSAGVTSADTISAGSLSITFGSNPAFNVNVAAGASLSDIASSINSASGNA
EEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCC
GVTASVITGSDGQHLVMQSNATGAANTISITGTGVNSKLTSGYTTVTPAADAQLTIDGTP
CEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEECCCC
VSSASNNVSSALTGVSLALSQAAVGTTQTITLSQDTAAATTAINNFATAYTNFVNTAKSL
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TSYDPTAQTAGPLLGDAMMNTIRNTLATTLSSGVTTGGTTYALGSIGINVDSTGAMSVDT
HCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEHH
AALTTALKSNSSAVAAIFNQTNGIAQALNANITSYTQTSGLIDQRTTAINADLTSVQGQA
HHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEHHHCCCHHHCCEEECCCHHHCCCCH
TQLQTYSSQLTTQYTAQFTALNTLMAQMANNTRYLTQLFGGQNSSGAMANNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ATTTPVSSTDITTLLSQAGQSIISGATNSSLDVNSLVTTLVNAKTAGQLQTLQTRQTND
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCC
NTQLSAIGQLKGALSALQTALTGLSNGTTLSSLAATASGSGIATTVTSGSGAVAGSYSVN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEECCEEEE
VTQLATANKLTSAGVTSADTISAGSLSITFGSNPAFNVNVAAGASLSDIASSINSASGNA
EEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCC
GVTASVITGSDGQHLVMQSNATGAANTISITGTGVNSKLTSGYTTVTPAADAQLTIDGTP
CEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEECCCC
VSSASNNVSSALTGVSLALSQAAVGTTQTITLSQDTAAATTAINNFATAYTNFVNTAKSL
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TSYDPTAQTAGPLLGDAMMNTIRNTLATTLSSGVTTGGTTYALGSIGINVDSTGAMSVDT
HCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEHH
AALTTALKSNSSAVAAIFNQTNGIAQALNANITSYTQTSGLIDQRTTAINADLTSVQGQA
HHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEHHHCCCHHHCCEEECCCHHHCCCCH
TQLQTYSSQLTTQYTAQFTALNTLMAQMANNTRYLTQLFGGQNSSGAMANNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]