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The map label for this gene is 78064797

Identifier: 78064797

GI number: 78064797

Start: 165639

End: 166040

Strand: Direct

Name: 78064797

Synonym: Bcep18194_A3320

Alternate gene names: NA

Gene position: 165639-166040 (Clockwise)

Preceding gene: 78064796

Following gene: 78064806

Centisome position: 4.48

GC content: 62.69

Gene sequence:

>402_bases
ATGGCGCGCTACATGCTCGACACCAACATGTGCCTCTACCTGATGAAGAATCAGCCGGAGCAGGTTGCGAGACGATTTGC
GCAGTGCTACACGGGGGACGTCGTGATGTCGGCGATCACGTACGCCGAACTCGAGTACGGCGTCACCGCGTGCGCGAGTC
CAGCGCGGGAGCGCGGCAATCTTGCCGCGCTGATCGACGATATTCCGGTCGCGCCGTTCGACGTCGCGGCTGCGCAAGCG
TACGGCCCGGTCCGCGAGGCAACCCGCGATCGGAAGAAGGATCACCTCGACAAGCTGATCGCCGCACACGCGGTGTCGCT
CGATGTCGTCCTCGTGACCAACAACGAGCGGGATTTCGACAGCTATCCGGGATTGCGGCTGGAAAACTGGCTGAACGACT
AG

Upstream 100 bases:

>100_bases
GGCCTTTGACGAACGTCCTCGATAAGTTCGCGAAATTCGGGCCGGATTTCATGGCCGAAGGGCGTGGCGACCACGAGCAG
GCCGAACGCGAGGGTTTGTG

Downstream 100 bases:

>100_bases
TGCCGGGTACCGTGTCCGGCGGTCATGCGGGAGATTGATCCGTCCCGCGCGACCGCCGGATCCGGCATCAGCACTCGACG
ATATTGACCGCCAGCCCGCC

Product: PilT protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MARYMLDTNMCLYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTACASPARERGNLAALIDDIPVAPFDVAAAQA
YGPVREATRDRKKDHLDKLIAAHAVSLDVVLVTNNERDFDSYPGLRLENWLND

Sequences:

>Translated_133_residues
MARYMLDTNMCLYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTACASPARERGNLAALIDDIPVAPFDVAAAQA
YGPVREATRDRKKDHLDKLIAAHAVSLDVVLVTNNERDFDSYPGLRLENWLND
>Mature_132_residues
ARYMLDTNMCLYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTACASPARERGNLAALIDDIPVAPFDVAAAQAY
GPVREATRDRKKDHLDKLIAAHAVSLDVVLVTNNERDFDSYPGLRLENWLND

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14886; Mature: 14755

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYMLDTNMCLYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTACASPARERGN
CCCEEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHCCCHHHCCC
LAALIDDIPVAPFDVAAAQAYGPVREATRDRKKDHLDKLIAAHAVSLDVVLVTNNERDFD
EEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCC
SYPGLRLENWLND
CCCCCCHHCCCCC
>Mature Secondary Structure 
ARYMLDTNMCLYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTACASPARERGN
CCEEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHCCCHHHCCC
LAALIDDIPVAPFDVAAAQAYGPVREATRDRKKDHLDKLIAAHAVSLDVVLVTNNERDFD
EEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCC
SYPGLRLENWLND
CCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]