| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064666
Identifier: 78064666
GI number: 78064666
Start: 12589
End: 13512
Strand: Direct
Name: 78064666
Synonym: Bcep18194_A3189
Alternate gene names: NA
Gene position: 12589-13512 (Clockwise)
Preceding gene: 78064665
Following gene: 78064667
Centisome position: 0.34
GC content: 45.24
Gene sequence:
>924_bases ATGCCCATTGTTAGCGAAAAACCTTTGATCGAAATCCTGTCGCCTGGAGAGCAACACGACAGGTTTGACATCAACTATTA CCTTCCAGAATTCATTCACGCGGAACGGTACATCGAGAATTGCGATGTCGAACTCACGACCCTGGGTGATGTAATGACCA ATGACGCCAGCTACGGCGTTCTTCCGCCATCCTCATGCTATTTGGAGGAGGGCGGCATCCCCCTCGTCAGATCATCAAAT TTATCGAACAACGGAATTGACTACGAAAGTGCCGTGCGGGTCCCGTCTGAATGGATTAGCTCCGAGCGCGCTCGAATTAA GGACAATGACGTGCTCATTAGCATTAAAGGTGCTCGTGCATTCTTCGATATGTGCGTTGCTTCAGACAAAACATCGGATG CAATTGTCAACGGAAGTATATTTAGATTCCAGTGCAAAGAACGATACGACCCCAATTTTGTAGTTTTGTGGTTGCTCAGC AGCCCAATTCAATCAATGGTATTTCGCGAGCGAACAAATCTTGGAATCAGCTATATTTCTCAAGATATATTGAAGAGCAT ACCTTTTCCGGAAATCGAAAAGAATAAACAACAACTCATTCTTCGTGGATATAACGCCGCCATAGAAATGCGGGACGAAA TGATCTCGTCCCTCAATGAAGTGGTTCGCGCAAAATCACTGGCCAAGAAGACGATAGATAAAATCTATAGAGATAGATTG GGAATGGAAGAGCCAGTCACGCCAGTACTGAAAGTTAGAGCCGTCGATTCATCAATGATTCAAGACAGGCTCGACTGGAA AACTTACGACCCTAACCTAATATCGGATGCGGATAAACTGGCAAAGGACTTCTCCGAAAAAACCTTTGTCAAGGATGTTG CAGTGATCAAGGATCACATACAAGCCTGCAACGGCCTATTCTAG
Upstream 100 bases:
>100_bases GGGGCGAAGCGAATTCGAGCAGTATGTGCAGGGTGCACTGGGTGAGCTGCTGAAAAAGAACGGTTTGAAAGAAGAGCACC CTTGGAAGGTGGAGTAATCA
Downstream 100 bases:
>100_bases TGACGATGTAAAGCTTATTCGCGTTAGGCTTTATGGGAAAGGGGCAGAGCTTCGGGAAATTAGATCTCCCGAAAGTATCT CGGGGCCGGTTGCGCAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPIVSEKPLIEILSPGEQHDRFDINYYLPEFIHAERYIENCDVELTTLGDVMTNDASYGVLPPSSCYLEEGGIPLVRSSN LSNNGIDYESAVRVPSEWISSERARIKDNDVLISIKGARAFFDMCVASDKTSDAIVNGSIFRFQCKERYDPNFVVLWLLS SPIQSMVFRERTNLGISYISQDILKSIPFPEIEKNKQQLILRGYNAAIEMRDEMISSLNEVVRAKSLAKKTIDKIYRDRL GMEEPVTPVLKVRAVDSSMIQDRLDWKTYDPNLISDADKLAKDFSEKTFVKDVAVIKDHIQACNGLF
Sequences:
>Translated_307_residues MPIVSEKPLIEILSPGEQHDRFDINYYLPEFIHAERYIENCDVELTTLGDVMTNDASYGVLPPSSCYLEEGGIPLVRSSN LSNNGIDYESAVRVPSEWISSERARIKDNDVLISIKGARAFFDMCVASDKTSDAIVNGSIFRFQCKERYDPNFVVLWLLS SPIQSMVFRERTNLGISYISQDILKSIPFPEIEKNKQQLILRGYNAAIEMRDEMISSLNEVVRAKSLAKKTIDKIYRDRL GMEEPVTPVLKVRAVDSSMIQDRLDWKTYDPNLISDADKLAKDFSEKTFVKDVAVIKDHIQACNGLF >Mature_306_residues PIVSEKPLIEILSPGEQHDRFDINYYLPEFIHAERYIENCDVELTTLGDVMTNDASYGVLPPSSCYLEEGGIPLVRSSNL SNNGIDYESAVRVPSEWISSERARIKDNDVLISIKGARAFFDMCVASDKTSDAIVNGSIFRFQCKERYDPNFVVLWLLSS PIQSMVFRERTNLGISYISQDILKSIPFPEIEKNKQQLILRGYNAAIEMRDEMISSLNEVVRAKSLAKKTIDKIYRDRLG MEEPVTPVLKVRAVDSSMIQDRLDWKTYDPNLISDADKLAKDFSEKTFVKDVAVIKDHIQACNGLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34892; Mature: 34761
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVSEKPLIEILSPGEQHDRFDINYYLPEFIHAERYIENCDVELTTLGDVMTNDASYGV CCCCCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCC LPPSSCYLEEGGIPLVRSSNLSNNGIDYESAVRVPSEWISSERARIKDNDVLISIKGARA CCCCCCEEECCCCCEEECCCCCCCCCCHHHHHCCCHHHHCCCCCEECCCCEEEEEECHHH FFDMCVASDKTSDAIVNGSIFRFQCKERYDPNFVVLWLLSSPIQSMVFRERTNLGISYIS HHHHHHCCCCCCCEEECCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHH QDILKSIPFPEIEKNKQQLILRGYNAAIEMRDEMISSLNEVVRAKSLAKKTIDKIYRDRL HHHHHHCCCCCCCCCHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMEEPVTPVLKVRAVDSSMIQDRLDWKTYDPNLISDADKLAKDFSEKTFVKDVAVIKDHI CCCCCCCHHHHEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QACNGLF HHHCCCC >Mature Secondary Structure PIVSEKPLIEILSPGEQHDRFDINYYLPEFIHAERYIENCDVELTTLGDVMTNDASYGV CCCCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCC LPPSSCYLEEGGIPLVRSSNLSNNGIDYESAVRVPSEWISSERARIKDNDVLISIKGARA CCCCCCEEECCCCCEEECCCCCCCCCCHHHHHCCCHHHHCCCCCEECCCCEEEEEECHHH FFDMCVASDKTSDAIVNGSIFRFQCKERYDPNFVVLWLLSSPIQSMVFRERTNLGISYIS HHHHHHCCCCCCCEEECCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHH QDILKSIPFPEIEKNKQQLILRGYNAAIEMRDEMISSLNEVVRAKSLAKKTIDKIYRDRL HHHHHHCCCCCCCCCHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMEEPVTPVLKVRAVDSSMIQDRLDWKTYDPNLISDADKLAKDFSEKTFVKDVAVIKDHI CCCCCCCHHHHEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QACNGLF HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA