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The map label for this gene is 78050037

Identifier: 78050037

GI number: 78050037

Start: 5169427

End: 5170395

Strand: Reverse

Name: 78050037

Synonym: XCV4481

Alternate gene names: NA

Gene position: 5170395-5169427 (Counterclockwise)

Preceding gene: 78050039

Following gene: 78050036

Centisome position: 99.84

GC content: 64.5

Gene sequence:

>969_bases
TTGCCGCCATCTTTTGACTCGTCCCCAACGCCGCTCATGCCCAAGACCCATCAGTTAAGTGCCGCCGTTCTCGCCGCGCT
CGTGCTCGCGCCTGCCGCTTACGCCGCCGACCCTGAGGTGTCTGCCGATACCGGTGCGACCGTGCAGCAACTCGATGCGG
TGTCGGTGATCGGCCAGGGCGAAACCCGCCAGGTGCAGCGCATCACCCCGCAGGACATTGCGGTGTTGCCACCGGGCACC
AGCATCCAGAAGCTGCTCAACCGCATGCCGGGCGTGAACGTGCAATCCAACGATGCGTTCGGTGCCAACGAAGAATCGCA
GACGATCAGCCTGCGCGGCTTCAACGGTACGCGCCTGGGCTATACGCTCGACGGCCTGCCGTTGGGCGACAACGCCTATG
GCAACTACAACGGCCTCAACATCAGCCGCGCATTGATTGCGGAAAACTTCGGCGGCGTGGAGCTGGCCTCGGGCATCGGT
GCGTTGGGCACGGCGTCGACCAGCAACCTGGGCGGCACCATCCAGTATTACTCGGCCGATCCGTCCAGCGTATTCGGCGG
GCAGGTGTCGCAGACGGTGGGCTCCGATGCCAATCGGCGCACCTTCCTGCGCGTGGATACCGGCGATTACAACGGGTTTT
CGGCGTATGTGTCCGGCATCAACGCCGAAGCCGACATGTGGGCGCGCCCGGAATCGCCGACCACCACGCGGCAGTTCAAT
GCCAAGGGCGTGTACCAGTTCGATGGCGGCAAGCTGACCGCATTCGCCGATACCTCGCGTACTTCGCAGGCCGACTATGC
GTACCTGTCCAAGAGCGGCATGGCGCGCGGCCTGGGCTGGGACTGGAATCTGTACGCGCCGGACTGGAACCGCGCATTGG
CTGCGGCGTATTGCGCACCGGCCACGCGCAATGCCGCGCGTTGCGGTTTCAGCGGCGGTGTCGACAACATCGACGATGCG
TACTACTAG

Upstream 100 bases:

>100_bases
GCTGCATGCCAACGCGACGCAGCAACGGCCAGGGATGCGAAACGGTTGTCGTTGCACTGTCATGTTTCGGTCGCATCGAC
GCAAGACAACTGTCGCACGC

Downstream 100 bases:

>100_bases
AGCCGCGCCTTGCGCGACGACGACCTGTTCTACGTGGCCGGCGATTTCCAGCCCAACGATGCGATCAGCCTGCACACGCA
GGTCTATCACCACGAGAACA

Product: TonB-dependent outer membrane receptor (N-terminal fragment)

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; Nb-Dependent Receptor; NB-Dependent Receptor-Like Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Protein; NB Dependent Receptor Protein; Outer Membrane Heme Receptor

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MPPSFDSSPTPLMPKTHQLSAAVLAALVLAPAAYAADPEVSADTGATVQQLDAVSVIGQGETRQVQRITPQDIAVLPPGT
SIQKLLNRMPGVNVQSNDAFGANEESQTISLRGFNGTRLGYTLDGLPLGDNAYGNYNGLNISRALIAENFGGVELASGIG
ALGTASTSNLGGTIQYYSADPSSVFGGQVSQTVGSDANRRTFLRVDTGDYNGFSAYVSGINAEADMWARPESPTTTRQFN
AKGVYQFDGGKLTAFADTSRTSQADYAYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNIDDA
YY

Sequences:

>Translated_322_residues
MPPSFDSSPTPLMPKTHQLSAAVLAALVLAPAAYAADPEVSADTGATVQQLDAVSVIGQGETRQVQRITPQDIAVLPPGT
SIQKLLNRMPGVNVQSNDAFGANEESQTISLRGFNGTRLGYTLDGLPLGDNAYGNYNGLNISRALIAENFGGVELASGIG
ALGTASTSNLGGTIQYYSADPSSVFGGQVSQTVGSDANRRTFLRVDTGDYNGFSAYVSGINAEADMWARPESPTTTRQFN
AKGVYQFDGGKLTAFADTSRTSQADYAYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNIDDA
YY
>Mature_321_residues
PPSFDSSPTPLMPKTHQLSAAVLAALVLAPAAYAADPEVSADTGATVQQLDAVSVIGQGETRQVQRITPQDIAVLPPGTS
IQKLLNRMPGVNVQSNDAFGANEESQTISLRGFNGTRLGYTLDGLPLGDNAYGNYNGLNISRALIAENFGGVELASGIGA
LGTASTSNLGGTIQYYSADPSSVFGGQVSQTVGSDANRRTFLRVDTGDYNGFSAYVSGINAEADMWARPESPTTTRQFNA
KGVYQFDGGKLTAFADTSRTSQADYAYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNIDDAY
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33876; Mature: 33744

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSFDSSPTPLMPKTHQLSAAVLAALVLAPAAYAADPEVSADTGATVQQLDAVSVIGQG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCC
ETRQVQRITPQDIAVLPPGTSIQKLLNRMPGVNVQSNDAFGANEESQTISLRGFNGTRLG
CCCHHEECCCCCEEEECCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEECCCCCCCC
YTLDGLPLGDNAYGNYNGLNISRALIAENFGGVELASGIGALGTASTSNLGGTIQYYSAD
EEECCEECCCCCCCCCCCCCHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCEEEEEECC
PSSVFGGQVSQTVGSDANRRTFLRVDTGDYNGFSAYVSGINAEADMWARPESPTTTRQFN
CCHHCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEC
AKGVYQFDGGKLTAFADTSRTSQADYAYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAP
CCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCC
ATRNAARCGFSGGVDNIDDAYY
CCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPSFDSSPTPLMPKTHQLSAAVLAALVLAPAAYAADPEVSADTGATVQQLDAVSVIGQG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCC
ETRQVQRITPQDIAVLPPGTSIQKLLNRMPGVNVQSNDAFGANEESQTISLRGFNGTRLG
CCCHHEECCCCCEEEECCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEECCCCCCCC
YTLDGLPLGDNAYGNYNGLNISRALIAENFGGVELASGIGALGTASTSNLGGTIQYYSAD
EEECCEECCCCCCCCCCCCCHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCEEEEEECC
PSSVFGGQVSQTVGSDANRRTFLRVDTGDYNGFSAYVSGINAEADMWARPESPTTTRQFN
CCHHCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEC
AKGVYQFDGGKLTAFADTSRTSQADYAYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAP
CCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCC
ATRNAARCGFSGGVDNIDDAYY
CCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA