| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is kgtP [H]
Identifier: 78049964
GI number: 78049964
Start: 5083463
End: 5084824
Strand: Reverse
Name: kgtP [H]
Synonym: XCV4408
Alternate gene names: 78049964
Gene position: 5084824-5083463 (Counterclockwise)
Preceding gene: 78049965
Following gene: 78049958
Centisome position: 98.19
GC content: 62.56
Gene sequence:
>1362_bases ATGAGCGCACCCCCATCGTCTCCGATCGCTGCCGGTTCTGGCACAGCTGCCGGCAGCCTTCGCCGCTCGGTGTCCAACAC GCTCAAGGGCTCGGCCGGCAACCTCGTCGAGTGGTACGACGTCTACGTCTATTCGGTGTTCGCCACCTACTTCGAGTCGC AGTTCTTTTCCAAGGAAGACAAGAACGCCACCATGTTCGTGTGGGCGATCTTTGCGATGACGTTCCTGATGCGCCCGATC GGCGCGTGGTATTTCGGCCGCTTCGCCGACCGTTATGGCCGCCGCCTGGCGTTGACCATTTCGGTATCGGTGATGGCGCT GTGCTCGTTCGTGATTGCGATCACGCCCACGGTGGCCACGATCGGCATCGCTGCGCCGATCATCTTGCTGGTGGCGCGCC TGCTGCAGGGCTTTGCGACCGGCGGCGAATACGGCACCAGCGCCACGTACATGTCCGAAGCGGCGATTCCCGGCCGGCGC GGGTTTTTGTCGTCGTTCCATTACGTGACGCTGGTGGGCGGGCACGTACTGGCACAGACCACCTTGCTGATCATGTTGCA TTTCTTCGATGCCTCGCAGGTCTCCGAATGGGGCTGGCGCGTGGCGTTCGGGCTGGGCGGCATCGGCGCGTTGGTGGTGT TCTGGCTGCGCCGCACGATGGATGAGTCGCTGAGCTCCGAATCCATCGCCGATTCGCGTACCGGCAAGGCCAAGGCCTCC GGCTCGATGCGCGAATTGTTCGTCAATCAGTGGCGTCCGCTGCTGTTGTGCTTTTTGATCACCGCCGGCGGCACGATCGC GTTCTACACCTATTCGGTCACCGGGCCGAAGATGATCCAGACCGCGTTCGCCGGTGGCGACGTGATGGCCGGCACCATCA TCAATCTGGTGGCGCTGACCGTGCTGATGCTGATGCAGCCGGTGGGCGGCTGGTTGTCGGACATCGTCGGGCGCAAGACC TTGCTGGTGTTCTTCGGCATCGGCGGCGTGCTCTACACCTGGTTCCTGGTGATGGAACTGCCCAAGCAGACCGACTGGTT GACCGCGTTCGCAATCCTCACCGTGGGCTTTGTGATCCTGACCGGCTACACCTCGATCAATGCCGTGGTGAAGGCGGAAT TGTTCCCCACCCACGTGCGCGCGCTGGGTGTCGGCCTTGGCTACGCGCTGGCCAATTCGGCCTTCGGCGGAACCGCGCCG TTGCTGTATCAGGCCTCGCTGAAGACCAACCACGTGACCGAGTTCGTGATCTATGCGACGGCGGTGATTGCGGTGTCGTT GGTGGTCTACATGTTCTTCCTGACCAACAAGGGCAGCAACTGGCTGGACGACGAAGCGGCGATGCATCAGCGCAAGCGGT GA
Upstream 100 bases:
>100_bases GTGTGCGAGTTGCCGCCATCTATAAGCCAAAATGCTTACATGCGTCACACAAGCGCGCACCTATACTCCGGTGCTGTCCC ACCGAAGAGGTTCTGACCGC
Downstream 100 bases:
>100_bases TGCGCGCGCGCGGGCAGAGCCCTTCCCTTCTCCCTGCGGGACATTGTCCCCCTTCATGGGGGAGAAGGTGCCCGAAGGGC GGATGAGGGGCGCCTCAGGT
Product: metabolite:H+ symporter family protein
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKEDKNATMFVWAIFAMTFLMRPI GAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVATIGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRR GFLSSFHYVTLVGGHVLAQTTLLIMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRRTMDESLSSESIADSRTGKAKAS GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALTVLMLMQPVGGWLSDIVGRKT LLVFFGIGGVLYTWFLVMELPKQTDWLTAFAILTVGFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAP LLYQASLKTNHVTEFVIYATAVIAVSLVVYMFFLTNKGSNWLDDEAAMHQRKR
Sequences:
>Translated_453_residues MSAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKEDKNATMFVWAIFAMTFLMRPI GAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVATIGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRR GFLSSFHYVTLVGGHVLAQTTLLIMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRRTMDESLSSESIADSRTGKAKAS GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALTVLMLMQPVGGWLSDIVGRKT LLVFFGIGGVLYTWFLVMELPKQTDWLTAFAILTVGFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAP LLYQASLKTNHVTEFVIYATAVIAVSLVVYMFFLTNKGSNWLDDEAAMHQRKR >Mature_452_residues SAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKEDKNATMFVWAIFAMTFLMRPIG AWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVATIGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRRG FLSSFHYVTLVGGHVLAQTTLLIMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRRTMDESLSSESIADSRTGKAKASG SMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALTVLMLMQPVGGWLSDIVGRKTL LVFFGIGGVLYTWFLVMELPKQTDWLTAFAILTVGFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAPL LYQASLKTNHVTEFVIYATAVIAVSLVVYMFFLTNKGSNWLDDEAAMHQRKR
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=436, Percent_Identity=41.0550458715596, Blast_Score=289, Evalue=3e-79, Organism=Escherichia coli, GI1790550, Length=375, Percent_Identity=28, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1788292, Length=431, Percent_Identity=29.0023201856148, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789941, Length=387, Percent_Identity=30.4909560723514, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082231, Length=221, Percent_Identity=27.1493212669683, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082404, Length=354, Percent_Identity=25.4237288135593, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49112; Mature: 48981
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKED CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KNATMFVWAIFAMTFLMRPIGAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHH IGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRRGFLSSFHYVTLVGGHVLAQT HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHCCHHHHHCHHHHHHH TLLIMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRRTMDESLSSESIADSRTGKAKAS HHHHHHHHHCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALT CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH VLMLMQPVGGWLSDIVGRKTLLVFFGIGGVLYTWFLVMELPKQTDWLTAFAILTVGFVIL HHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAPLLYQASLKTNHVTEFVIYAT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHH AVIAVSLVVYMFFLTNKGSNWLDDEAAMHQRKR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure SAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKED CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KNATMFVWAIFAMTFLMRPIGAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHH IGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRRGFLSSFHYVTLVGGHVLAQT HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHCCHHHHHCHHHHHHH TLLIMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRRTMDESLSSESIADSRTGKAKAS HHHHHHHHHCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALT CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH VLMLMQPVGGWLSDIVGRKTLLVFFGIGGVLYTWFLVMELPKQTDWLTAFAILTVGFVIL HHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAPLLYQASLKTNHVTEFVIYAT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHH AVIAVSLVVYMFFLTNKGSNWLDDEAAMHQRKR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]