| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is folE [H]
Identifier: 78049958
GI number: 78049958
Start: 5077009
End: 5077611
Strand: Reverse
Name: folE [H]
Synonym: XCV4402
Alternate gene names: 78049958
Gene position: 5077611-5077009 (Counterclockwise)
Preceding gene: 78049964
Following gene: 78049957
Centisome position: 98.05
GC content: 65.17
Gene sequence:
>603_bases ATGAGCCAGTCCAACCAGCCCGATTCCTCCGTCACCCAGACCCAGGCCGAAGAGGCCGTGCGCACCCTGTTGCGCTGGGC GGGCGAAGATCCCACGCGCGAGGGCCTGCTGGACACCCCGCGCCGGGTGGCTGAAGCCTACGGCGACTGGTTCAGCGGCT ATCGCGAAGAACCGCGCGAATACCTGGAACGCACCTTCGAGGAAGTGGCCGGCTACGACGAGTTGATCGTGCTGCGCGAC ATTTCCTACGAAAGCCATTGCGAGCACCACATGGCGCCGATCATCGGCAAGGTGCACGTGGGCTATCTGCCGCGTGGCAA GGTCGTCGGCATCAGCAAGCTGGCCCGCGTGGTGGAAAGCTACGCGCGCCGCTTCCAGGTGCAGGAAAAGATGACCGCGC AGATCGCCCAATGCATCCAGGACGTGCTGCAGCCGCTTGGCGTGGGCGTGGTGGTGGAAGGCGCGCACGAGTGCATGACC ACCCGCGGCATCCACAAGCGCGGCGTCAGCATGGTGACCTCCAAGATGCTGGGCACCTTCCGCGAAGATGCGCGCACCCG CGCCGAATTCCTGCAGTTCATCGAAGTGGGCGGCAAGCGTTGA
Upstream 100 bases:
>100_bases AATCAATAGTCACTGAACATTTGCAAGCTGGCGCAACCGCCACTGGGGCGGCCGGGCCGTCCTCGGGTACCATGCACGCC CCCTTTGGGTGCACCTGCGC
Downstream 100 bases:
>100_bases GGCAGTCGCGGCAGCGCCCATGAAGCACCAGGCACGTATCGCCGGTTATCGGCAACTGCGCGAGCAGCCGGTATGGAAAC TGCTCGCCGCCGACCACGCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSQSNQPDSSVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYREEPREYLERTFEEVAGYDELIVLRD ISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMT TRGIHKRGVSMVTSKMLGTFREDARTRAEFLQFIEVGGKR
Sequences:
>Translated_200_residues MSQSNQPDSSVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYREEPREYLERTFEEVAGYDELIVLRD ISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMT TRGIHKRGVSMVTSKMLGTFREDARTRAEFLQFIEVGGKR >Mature_199_residues SQSNQPDSSVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYREEPREYLERTFEEVAGYDELIVLRDI SYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTT RGIHKRGVSMVTSKMLGTFREDARTRAEFLQFIEVGGKR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=188, Percent_Identity=48.4042553191489, Blast_Score=184, Evalue=3e-47, Organism=Homo sapiens, GI4503949, Length=188, Percent_Identity=48.4042553191489, Blast_Score=184, Evalue=3e-47, Organism=Homo sapiens, GI66932970, Length=158, Percent_Identity=44.3037974683544, Blast_Score=140, Evalue=7e-34, Organism=Homo sapiens, GI66932972, Length=148, Percent_Identity=46.6216216216216, Blast_Score=137, Evalue=6e-33, Organism=Escherichia coli, GI1788476, Length=175, Percent_Identity=36, Blast_Score=116, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17560486, Length=179, Percent_Identity=47.4860335195531, Blast_Score=182, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=51.685393258427, Blast_Score=184, Evalue=1e-47, Organism=Drosophila melanogaster, GI24656782, Length=176, Percent_Identity=48.2954545454545, Blast_Score=160, Evalue=8e-40, Organism=Drosophila melanogaster, GI24656796, Length=176, Percent_Identity=48.2954545454545, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI24656791, Length=176, Percent_Identity=48.2954545454545, Blast_Score=159, Evalue=1e-39,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22644; Mature: 22513
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNQPDSSVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYREEPRE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVES HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH YARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRGVSMVTSKMLGTF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDARTRAEFLQFIEVGGKR HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQSNQPDSSVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYREEPRE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVES HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH YARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRGVSMVTSKMLGTF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDARTRAEFLQFIEVGGKR HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]