Click here to switch to the map view.

The map label for this gene is 78049833

Identifier: 78049833

GI number: 78049833

Start: 4911856

End: 4912764

Strand: Reverse

Name: 78049833

Synonym: XCV4277

Alternate gene names: NA

Gene position: 4912764-4911856 (Counterclockwise)

Preceding gene: 78049837

Following gene: 78049830

Centisome position: 94.87

GC content: 60.73

Gene sequence:

>909_bases
ATGCGCGCAATGGCGTTTTCCGTCTGGCTATGTGTGCTGGCACTGTGTGCCTGCAGTGCTGCACAGGCCAATGACAGCAG
TTTCGGCGACGACAATGGCACCATCCGCCTGCTGCATCAGCCCGACATCAGTATGGACCGCGAAGCGCTATTGCTCAGCG
AAGAACGCGTGCAAGTGGACTATGTGTTCACCAACACCAGCGAGCGCGACCTGAGCGTGCCAGTGGCCTTCCCGATGCCG
CCGATGTACTTTGGCATGGCCGACCATAATGCGCTGAGCGATTTCAAGCTCTGGGCCGACGGCAAACCGGTTGCCACCAC
GCGCAAGCTGGTAGTGCTGCTGGATGACGGTAGTGACATCTCCACCGCGTTCGCCGCCACCGGCTGGACCCAGGATGATG
TTGCCGCGTTCACCGAATCGGCCACGCCCCCGAAGGGGCGCAAGCCGCTGCCCGCGCGCTGGGTCGATGGCGATGGGCAA
CCGCGTTTCACGCTCAACGCCTACTTCGTCTGGCAGCGGAAATTTCCTGCCAAGGCAAGCGTGCAGATCCGCCACACCTA
TACACCCAGCCTGTCTACCGGCGTCCCGCAGCCCAGCAGCTATTTGCTGAAGGCGTATGCAAAAGACACCTGCATCGAAC
CGGCGACCAAGGTCAGCATGCAGCGTCGTAAGGGCAAGTACGGGTTGGGATGGACCAACCTGCGCTACGTGCTCACGACC
GGCAAGAACTGGAACGGCCCGATCAAGGACTTCCAGCTGACCATCCGCAAGCAGGCGGCCAGCGACATCCTGAGCCTGTG
TTTCGACGGCGAACTGAAAAAGATCGACCCGCTGACCTTCCAGTTCAAGCAGGCCAACTTCGTGCCGATGCGCGATTTGA
ACGTGTTGTTCGTGCGCGCACCGGAATAA

Upstream 100 bases:

>100_bases
CACGCGTCGCGCGACGCGCTGCCCACCATTCGGTCGAGCCCGCGCGTGGCATGCTGTGCGGCCCGGCGCGCGGGTACGCC
GGCCTTTCAAGGATCACCTC

Downstream 100 bases:

>100_bases
ACCGGACAAGCAGCAGGGCAGCCGGGCGCGACGAAGCGTCTTGCAACGCTCACCACGATCGTATGCGCCAACGCGCATCG
GTTGTCTTCTGCAAATGAAG

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRAMAFSVWLCVLALCACSAAQANDSSFGDDNGTIRLLHQPDISMDREALLLSEERVQVDYVFTNTSERDLSVPVAFPMP
PMYFGMADHNALSDFKLWADGKPVATTRKLVVLLDDGSDISTAFAATGWTQDDVAAFTESATPPKGRKPLPARWVDGDGQ
PRFTLNAYFVWQRKFPAKASVQIRHTYTPSLSTGVPQPSSYLLKAYAKDTCIEPATKVSMQRRKGKYGLGWTNLRYVLTT
GKNWNGPIKDFQLTIRKQAASDILSLCFDGELKKIDPLTFQFKQANFVPMRDLNVLFVRAPE

Sequences:

>Translated_302_residues
MRAMAFSVWLCVLALCACSAAQANDSSFGDDNGTIRLLHQPDISMDREALLLSEERVQVDYVFTNTSERDLSVPVAFPMP
PMYFGMADHNALSDFKLWADGKPVATTRKLVVLLDDGSDISTAFAATGWTQDDVAAFTESATPPKGRKPLPARWVDGDGQ
PRFTLNAYFVWQRKFPAKASVQIRHTYTPSLSTGVPQPSSYLLKAYAKDTCIEPATKVSMQRRKGKYGLGWTNLRYVLTT
GKNWNGPIKDFQLTIRKQAASDILSLCFDGELKKIDPLTFQFKQANFVPMRDLNVLFVRAPE
>Mature_302_residues
MRAMAFSVWLCVLALCACSAAQANDSSFGDDNGTIRLLHQPDISMDREALLLSEERVQVDYVFTNTSERDLSVPVAFPMP
PMYFGMADHNALSDFKLWADGKPVATTRKLVVLLDDGSDISTAFAATGWTQDDVAAFTESATPPKGRKPLPARWVDGDGQ
PRFTLNAYFVWQRKFPAKASVQIRHTYTPSLSTGVPQPSSYLLKAYAKDTCIEPATKVSMQRRKGKYGLGWTNLRYVLTT
GKNWNGPIKDFQLTIRKQAASDILSLCFDGELKKIDPLTFQFKQANFVPMRDLNVLFVRAPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33690; Mature: 33690

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMAFSVWLCVLALCACSAAQANDSSFGDDNGTIRLLHQPDISMDREALLLSEERVQVD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEE
YVFTNTSERDLSVPVAFPMPPMYFGMADHNALSDFKLWADGKPVATTRKLVVLLDDGSDI
EEEECCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCC
STAFAATGWTQDDVAAFTESATPPKGRKPLPARWVDGDGQPRFTLNAYFVWQRKFPAKAS
CHHEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEECCCCCCE
VQIRHTYTPSLSTGVPQPSSYLLKAYAKDTCIEPATKVSMQRRKGKYGLGWTNLRYVLTT
EEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEE
GKNWNGPIKDFQLTIRKQAASDILSLCFDGELKKIDPLTFQFKQANFVPMRDLNVLFVRA
CCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEECCCEEEEEEC
PE
CC
>Mature Secondary Structure
MRAMAFSVWLCVLALCACSAAQANDSSFGDDNGTIRLLHQPDISMDREALLLSEERVQVD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEE
YVFTNTSERDLSVPVAFPMPPMYFGMADHNALSDFKLWADGKPVATTRKLVVLLDDGSDI
EEEECCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCC
STAFAATGWTQDDVAAFTESATPPKGRKPLPARWVDGDGQPRFTLNAYFVWQRKFPAKAS
CHHEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEECCCCCCE
VQIRHTYTPSLSTGVPQPSSYLLKAYAKDTCIEPATKVSMQRRKGKYGLGWTNLRYVLTT
EEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEE
GKNWNGPIKDFQLTIRKQAASDILSLCFDGELKKIDPLTFQFKQANFVPMRDLNVLFVRA
CCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEECCCEEEEEEC
PE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA