| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yhhU [C]
Identifier: 78049823
GI number: 78049823
Start: 4902030
End: 4902659
Strand: Reverse
Name: yhhU [C]
Synonym: XCV4267
Alternate gene names: 78049823
Gene position: 4902659-4902030 (Counterclockwise)
Preceding gene: 78049825
Following gene: 78049820
Centisome position: 94.67
GC content: 68.57
Gene sequence:
>630_bases ATGTGGCCGAATGTTCGGCTTGGTGCACGGCGCGTGACAGCGCATGCGAGCTGGCAGGTTGGCCCGGTGCAGCTGTGGCT ACGCCCGCACCGCCCCGGCGAGCGTGGCGAGCCGCAGGCGCGTCAGTTGCTCGGCCCGGCCTTGGGCATCGACCCGGCAG TGGTGCCATTGCAGCGCGATGCACGCGGGCGTCCCTCGTTGCAGCCGGCGCTGCCCGACCGCGATACCGGTTGGAGCCAC AGCGGCGACTATCTGCTGGTAGGGCTGGGCCAGGGCGTGCGACTGGGCGTGGATCTGGAGCGCATTCGTGCGCGCCCGCG TGTGCTGGAGATCGCGCAACGCTTCTTTCATCGCGATGAAATCGCCTTGCTCGCTGCGCTGGCGCCGGACGCACAACACG CGTTGTTCTTCCGGCTGTGGTGCGCCAAGGAAGCCTTGCTCAAGGCCCATGGGCATGGCCTGTCGTTCGGCTTGCACCGG CTTGCGTATGCGCCCGTGCCCGACGGCGCACTGCGCCTGCAGTGGTGCGATCCGGAACTTGGCCAGGCCGAACACTGGCA GCTGCACGAATGGTGGGCCACTCCAGAGTGCCGCGCCGCATTGGCGTTCCATCCGTTGGCGGGCGCGTAA
Upstream 100 bases:
>100_bases TGCCCATGTTGCTGATCTCCATGTTCTCGTGCACCGGAAGTGGTGCATGGGCGCCATTCAACGCAGCTGCGCGTGAAGCA GCTGTCGAGCGCGATGAACG
Downstream 100 bases:
>100_bases TCCGTCCGCCGCGTTCCTAAGCCACGCCGTGCGGCAGAATCGGTTGACGGAACTGCGCCACCCCATCCAGGTCGCGCAAC GTCACCGTGAGGACGCCGCT
Product: 4'-phosphopantetheinyl transferase superfamily protein
Products: adenosine 3',5'-bisphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MWPNVRLGARRVTAHASWQVGPVQLWLRPHRPGERGEPQARQLLGPALGIDPAVVPLQRDARGRPSLQPALPDRDTGWSH SGDYLLVGLGQGVRLGVDLERIRARPRVLEIAQRFFHRDEIALLAALAPDAQHALFFRLWCAKEALLKAHGHGLSFGLHR LAYAPVPDGALRLQWCDPELGQAEHWQLHEWWATPECRAALAFHPLAGA
Sequences:
>Translated_209_residues MWPNVRLGARRVTAHASWQVGPVQLWLRPHRPGERGEPQARQLLGPALGIDPAVVPLQRDARGRPSLQPALPDRDTGWSH SGDYLLVGLGQGVRLGVDLERIRARPRVLEIAQRFFHRDEIALLAALAPDAQHALFFRLWCAKEALLKAHGHGLSFGLHR LAYAPVPDGALRLQWCDPELGQAEHWQLHEWWATPECRAALAFHPLAGA >Mature_209_residues MWPNVRLGARRVTAHASWQVGPVQLWLRPHRPGERGEPQARQLLGPALGIDPAVVPLQRDARGRPSLQPALPDRDTGWSH SGDYLLVGLGQGVRLGVDLERIRARPRVLEIAQRFFHRDEIALLAALAPDAQHALFFRLWCAKEALLKAHGHGLSFGLHR LAYAPVPDGALRLQWCDPELGQAEHWQLHEWWATPECRAALAFHPLAGA
Specific function: Probably transfers the 4'-phosphopantetheine moiety from coenzyme A (CoA) to a serine residue of a carrier protein domain [H]
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. Gsp/sfp/hetI/acpT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: NA
Molecular weight: Translated: 23322; Mature: 23322
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPNVRLGARRVTAHASWQVGPVQLWLRPHRPGERGEPQARQLLGPALGIDPAVVPLQRD CCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC ARGRPSLQPALPDRDTGWSHSGDYLLVGLGQGVRLGVDLERIRARPRVLEIAQRFFHRDE CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHCCCHHHHHHHHHHCHHH IALLAALAPDAQHALFFRLWCAKEALLKAHGHGLSFGLHRLAYAPVPDGALRLQWCDPEL HHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEEEECCCCC GQAEHWQLHEWWATPECRAALAFHPLAGA CCCCCCEEEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure MWPNVRLGARRVTAHASWQVGPVQLWLRPHRPGERGEPQARQLLGPALGIDPAVVPLQRD CCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC ARGRPSLQPALPDRDTGWSHSGDYLLVGLGQGVRLGVDLERIRARPRVLEIAQRFFHRDE CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHCCCHHHHHHHHHHCHHH IALLAALAPDAQHALFFRLWCAKEALLKAHGHGLSFGLHRLAYAPVPDGALRLQWCDPEL HHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEEEECCCCC GQAEHWQLHEWWATPECRAALAFHPLAGA CCCCCCEEEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Coenzyme A; apo-[acyl carrier protein] [C]
Specific reaction: Coenzyme A + apo-[acyl carrier protein] = adenosine 3',5'-bisphosphate + [acyl carrier protein] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]