| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is nodL [H]
Identifier: 78049802
GI number: 78049802
Start: 4874921
End: 4875544
Strand: Reverse
Name: nodL [H]
Synonym: XCV4246
Alternate gene names: 78049802
Gene position: 4875544-4874921 (Counterclockwise)
Preceding gene: 78049804
Following gene: 78049801
Centisome position: 94.15
GC content: 65.87
Gene sequence:
>624_bases ATGCCACCCTGTCAGCAGTTCATTGCACAGGTACCCGGCGGCATGCAAACCGAAAAACAGAAGATGCTGGCAGGCGAGCT CTACAACGCCACCGATGCGCAACTGCAGGCCGATCAAGCGGCGGCTGCGGCGTGGATGGAGCGCTACAACGCCACTGGCG CGCAGCCATCCACACAGCGGCATGCATTGCTGGTCGAGCGGCTCGCCGAGGTGGGTGCCGGTGCGGTGATCCGGCCGCCA TTTCATTGCGATTACGGCTACAACATCCATCTGGGCGCGGGCGTGTTCCTCAATTTCAATTGCGTGATTCTGGATATCTG TCAGGTGCATATCGGCGAAGGCACGCAGGTGGGGCCCGCCGTGCAGTTCTACGCTGCCGATCATCCGCGCGATGCGGCCG GACGCGCCAGCGGGCTGGAGTTCGGACGGCCGATTCGCGTCGGGCGCAATGTGTGGATCGGTGGCGGGGCGATCATCCTG CCGGGCGTCAGCATTGGCGACGACGCAGTGATCGGTGCCGGTGCGGTGGTCACGCGCGATGTGCCGGCCGGCGCGACCGC CGTGGGCAATCCGGCGCGCGTGCGCGTACCCCGGGGTGCTGCCGATGAAGCGCCCACTGACTGA
Upstream 100 bases:
>100_bases GTGAGCGCGCCAATCGCTTTAGCGAATAGGCAGATCGTGAGGTTCTGAGCCGGCAATCGGGGCTATTGGTGCATCGCTCG ATGCGTAGCGCGCTGCATCC
Downstream 100 bases:
>100_bases AGGCAACCAAGAAGCGCCGCGACCGAAGCTGTCAGGCGGACGTGGCCGCTGCGCAATGCAGCTCATACGCAAACAGGGCA GTTTTGAGCGCGTTACTGGC
Product: putative acetyltransferase
Products: CoA; acetylmaltose [C]
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPPCQQFIAQVPGGMQTEKQKMLAGELYNATDAQLQADQAAAAAWMERYNATGAQPSTQRHALLVERLAEVGAGAVIRPP FHCDYGYNIHLGAGVFLNFNCVILDICQVHIGEGTQVGPAVQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIIL PGVSIGDDAVIGAGAVVTRDVPAGATAVGNPARVRVPRGAADEAPTD
Sequences:
>Translated_207_residues MPPCQQFIAQVPGGMQTEKQKMLAGELYNATDAQLQADQAAAAAWMERYNATGAQPSTQRHALLVERLAEVGAGAVIRPP FHCDYGYNIHLGAGVFLNFNCVILDICQVHIGEGTQVGPAVQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIIL PGVSIGDDAVIGAGAVVTRDVPAGATAVGNPARVRVPRGAADEAPTD >Mature_206_residues PPCQQFIAQVPGGMQTEKQKMLAGELYNATDAQLQADQAAAAAWMERYNATGAQPSTQRHALLVERLAEVGAGAVIRPPF HCDYGYNIHLGAGVFLNFNCVILDICQVHIGEGTQVGPAVQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIILP GVSIGDDAVIGAGAVVTRDVPAGATAVGNPARVRVPRGAADEAPTD
Specific function: Acetyltransferase implicated in the O-acetylation of Nod factors [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786664, Length=180, Percent_Identity=48.8888888888889, Blast_Score=187, Evalue=4e-49, Organism=Escherichia coli, GI1786537, Length=175, Percent_Identity=36.5714285714286, Blast_Score=130, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6322243, Length=189, Percent_Identity=38.6243386243386, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 21579; Mature: 21447
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPCQQFIAQVPGGMQTEKQKMLAGELYNATDAQLQADQAAAAAWMERYNATGAQPSTQR CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH HALLVERLAEVGAGAVIRPPFHCDYGYNIHLGAGVFLNFNCVILDICQVHIGEGTQVGPA HHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCEEEEECCEEEEEEEHHHCCCCCCCCCE VQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIILPGVSIGDDAVIGAGAVVTRD EEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEECCEEEECCCCCCCCCEECCCEEEEEC VPAGATAVGNPARVRVPRGAADEAPTD CCCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure PPCQQFIAQVPGGMQTEKQKMLAGELYNATDAQLQADQAAAAAWMERYNATGAQPSTQR CHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH HALLVERLAEVGAGAVIRPPFHCDYGYNIHLGAGVFLNFNCVILDICQVHIGEGTQVGPA HHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCEEEEECCEEEEEEEHHHCCCCCCCCCE VQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIILPGVSIGDDAVIGAGAVVTRD EEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEECCEEEECCCCCCCCCEECCCEEEEEC VPAGATAVGNPARVRVPRGAADEAPTD CCCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 62 {glucose}} 90 {maltose}} 0.018 {acetyl-CoA}} 40 {triethanolamine}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1558960; 8801423; 11481432 [H]