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The map label for this gene is 78049773

Identifier: 78049773

GI number: 78049773

Start: 4841198

End: 4843165

Strand: Reverse

Name: 78049773

Synonym: XCV4217

Alternate gene names: NA

Gene position: 4843165-4841198 (Counterclockwise)

Preceding gene: 78049774

Following gene: 78049772

Centisome position: 93.53

GC content: 65.5

Gene sequence:

>1968_bases
ATGCCGCGCACCATCACGCTGCACTCCGACCTTGGCGAGCGCCTGCTGCTGCATCGCATGCAGGCCAGCGAAGCGTTGGG
GCAGCTGTTCGACTACCGCATCGATGCGTTGTGCACCGAACTGCAGCCCAACCTGCGTGATCTGCTTGGCACGCCAGTGG
CGGTGCAGCTGGCCGATGGCGAGGGCGAACAGCGCTGGTATCACGGCATGGTGGCCAGTTGCGCGCACAACGGCTACGCC
GTGGTCGATGCGCTCGATTACGCCGTGCTTGAACTGCAGGTGGTGCCCAAACCATGGCTGCTGACCCAGCGCCGCGATTG
CCGCATCTATCAGGACATGAGCGTGCCGGAGATCGTCACCAGCGTGCTGGGCGAGATCGGCTACGGCGATGTGCAGCAGC
AGTTGAGCGCGCAGTACGCCAAGCGCACCTACTGCGTGCAATACCGCGAGGACGATTTCAGCTTCATCAGCCGGCTGCTG
GAACGCGAAGGCATCTACTACTACTTCACCCACACCCGCAGTGCGCATACGTTGGTGCTGGCCGATGCACTGGGTGCGCA
TGCAACGAAAAACGGCGTGGACAGCCTGCCCTATGTGCCGCCGGGAACCGATGACCGGCGCCTGATGCGCTCGGTGGTGA
GCCATTGGCGCAGTGCGCGCGGCGTGCATTCCAGCCAGCATGGCAGCACCGACTACGACCCGCTGCAGCCGCGTGCATCG
CTGGCCGCCGATGCCGATGCCGGCGGCGAACAGTTGCACACCGTCGATGGTCTGATCGCCTTCGACTACCCCGGCGCGCA
TACCGTGCAGGCCGACGGTCGTCGCTACATGCAGGTGCGCACCGAGGCGCACAACGTGCAGCGCGCCAGCCATGCAGCCA
CCACCAATGCCTGCGGCCTGATGGTCGGTGCCTTGTTTCGCTTGCGCGGGTTCCCGCGCGCCGAACTCAATCAGGAATAT
CTGGTGCTGTCGGCGCACACCACGCTGGCCGCGCCCGAACACGGCAGCGGCGAGCCGCCGTTTTCCAGCAGCGTGCAGGT
GATGGAAAGCCGGCTGCCGTTCCGTAGCCTGCAACGCACCGCAACGCCAACCATTGCCGGCCTGCAGACGGCGGTGGTGA
CCGGCGACACCGACGAGGACATTGCGGTGGATGCGCATGGCCGCGTGCAGGTGACCTTTCACTGGGCCACTGCGGCACGC
CCGCATGCCGCGCCGTCGTGCTGGGTGCGTGTGGCTTCGATGTGGGCGGGCAAGGGCTGGGGCGCAATGAGCCTGCCGCG
CGTGGGGCAGGAAGTGGTGGTGAGCTTTCTGGAAGGCGACCCGGACCGCCCGTTGATCGTGGGCAGCGTCTACAACGGCG
ACCATGCGCCGCCGTTTTCCTTGCCCGATAACAAGACCCAAAGCGGCGTGCGCAGCCGCAGCCTGCTGGGCGGCGCTGCC
GATTTCAACGAGTTGCGTTTCGACGACAAGGCCGGCGCGGAAGAACTCTACCTGCGCGCGCAGCGCGATTTGCGCGAAGA
GGTGCAGCACGACCACACCAGTACCATCGACAACGATCGGGTCCTGGCGGTCAAGCACGACCGTCGTGCGCGGATCGACA
ACAACGACAGCGTGGAGGTCGGCAAGAAGCTGCTGCTGAAAGCCGGCGAAGAGATCGAGTTGGTGACCGGCAGCGCGCGG
CTGGTGATGAAACACAACGGCGAGATCGTGTTGAGCGGCATCAAGATCCTGGTCGATGCCAGCTCGGAGGCCAAGATCAC
CTCCACCGCCATCAAGCTGTTGGCCAATGCACAGCTGCAGGCCAAATCGCCGGCCACCGAGGTGGCTGGCGATGCCACGC
TCAAACTGACCTCCGGCGGCATGCTCAGCGCCGAAGCCGGTGCCTCGGCCACGCTCAAGGGCCCGCTGGTCAGCATCAAG
GCCGACGCCTTGGTGCAGGTCGGCGGCGGCCTGATCATGATCGGATGA

Upstream 100 bases:

>100_bases
AGTTGCCGTGCCTTTAGCCGCCTGACGTTGCACGCGCGGGCGCAACGCGGCGCCGTCGGTCAGCGCAACGTGCGTTGCCC
CATCACCTGTGGATGCTTCG

Downstream 100 bases:

>100_bases
GCGCGCCCACGCTCTCGCTGGCGCAGGCCTGTGCGCAGATGCAGCTGTCTGCGCCGGCCTGCGCACAGCTTAGTACGCCG
ATCACGCCGCAGGCGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; VgrG Family T6SS G; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs/Vgr-Family Protein; Vgr Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 655; Mature: 654

Protein sequence:

>655_residues
MPRTITLHSDLGERLLLHRMQASEALGQLFDYRIDALCTELQPNLRDLLGTPVAVQLADGEGEQRWYHGMVASCAHNGYA
VVDALDYAVLELQVVPKPWLLTQRRDCRIYQDMSVPEIVTSVLGEIGYGDVQQQLSAQYAKRTYCVQYREDDFSFISRLL
EREGIYYYFTHTRSAHTLVLADALGAHATKNGVDSLPYVPPGTDDRRLMRSVVSHWRSARGVHSSQHGSTDYDPLQPRAS
LAADADAGGEQLHTVDGLIAFDYPGAHTVQADGRRYMQVRTEAHNVQRASHAATTNACGLMVGALFRLRGFPRAELNQEY
LVLSAHTTLAAPEHGSGEPPFSSSVQVMESRLPFRSLQRTATPTIAGLQTAVVTGDTDEDIAVDAHGRVQVTFHWATAAR
PHAAPSCWVRVASMWAGKGWGAMSLPRVGQEVVVSFLEGDPDRPLIVGSVYNGDHAPPFSLPDNKTQSGVRSRSLLGGAA
DFNELRFDDKAGAEELYLRAQRDLREEVQHDHTSTIDNDRVLAVKHDRRARIDNNDSVEVGKKLLLKAGEEIELVTGSAR
LVMKHNGEIVLSGIKILVDASSEAKITSTAIKLLANAQLQAKSPATEVAGDATLKLTSGGMLSAEAGASATLKGPLVSIK
ADALVQVGGGLIMIG

Sequences:

>Translated_655_residues
MPRTITLHSDLGERLLLHRMQASEALGQLFDYRIDALCTELQPNLRDLLGTPVAVQLADGEGEQRWYHGMVASCAHNGYA
VVDALDYAVLELQVVPKPWLLTQRRDCRIYQDMSVPEIVTSVLGEIGYGDVQQQLSAQYAKRTYCVQYREDDFSFISRLL
EREGIYYYFTHTRSAHTLVLADALGAHATKNGVDSLPYVPPGTDDRRLMRSVVSHWRSARGVHSSQHGSTDYDPLQPRAS
LAADADAGGEQLHTVDGLIAFDYPGAHTVQADGRRYMQVRTEAHNVQRASHAATTNACGLMVGALFRLRGFPRAELNQEY
LVLSAHTTLAAPEHGSGEPPFSSSVQVMESRLPFRSLQRTATPTIAGLQTAVVTGDTDEDIAVDAHGRVQVTFHWATAAR
PHAAPSCWVRVASMWAGKGWGAMSLPRVGQEVVVSFLEGDPDRPLIVGSVYNGDHAPPFSLPDNKTQSGVRSRSLLGGAA
DFNELRFDDKAGAEELYLRAQRDLREEVQHDHTSTIDNDRVLAVKHDRRARIDNNDSVEVGKKLLLKAGEEIELVTGSAR
LVMKHNGEIVLSGIKILVDASSEAKITSTAIKLLANAQLQAKSPATEVAGDATLKLTSGGMLSAEAGASATLKGPLVSIK
ADALVQVGGGLIMIG
>Mature_654_residues
PRTITLHSDLGERLLLHRMQASEALGQLFDYRIDALCTELQPNLRDLLGTPVAVQLADGEGEQRWYHGMVASCAHNGYAV
VDALDYAVLELQVVPKPWLLTQRRDCRIYQDMSVPEIVTSVLGEIGYGDVQQQLSAQYAKRTYCVQYREDDFSFISRLLE
REGIYYYFTHTRSAHTLVLADALGAHATKNGVDSLPYVPPGTDDRRLMRSVVSHWRSARGVHSSQHGSTDYDPLQPRASL
AADADAGGEQLHTVDGLIAFDYPGAHTVQADGRRYMQVRTEAHNVQRASHAATTNACGLMVGALFRLRGFPRAELNQEYL
VLSAHTTLAAPEHGSGEPPFSSSVQVMESRLPFRSLQRTATPTIAGLQTAVVTGDTDEDIAVDAHGRVQVTFHWATAARP
HAAPSCWVRVASMWAGKGWGAMSLPRVGQEVVVSFLEGDPDRPLIVGSVYNGDHAPPFSLPDNKTQSGVRSRSLLGGAAD
FNELRFDDKAGAEELYLRAQRDLREEVQHDHTSTIDNDRVLAVKHDRRARIDNNDSVEVGKKLLLKAGEEIELVTGSARL
VMKHNGEIVLSGIKILVDASSEAKITSTAIKLLANAQLQAKSPATEVAGDATLKLTSGGMLSAEAGASATLKGPLVSIKA
DALVQVGGGLIMIG

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71172; Mature: 71041

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTITLHSDLGERLLLHRMQASEALGQLFDYRIDALCTELQPNLRDLLGTPVAVQLADG
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECC
EGEQRWYHGMVASCAHNGYAVVDALDYAVLELQVVPKPWLLTQRRDCRIYQDMSVPEIVT
CCCHHHHHHHHHHHCCCCEEEEHHHCEEEEEEEECCCCCEECCCCCCEEECCCCHHHHHH
SVLGEIGYGDVQQQLSAQYAKRTYCVQYREDDFSFISRLLEREGIYYYFTHTRSAHTLVL
HHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCEEEEE
ADALGAHATKNGVDSLPYVPPGTDDRRLMRSVVSHWRSARGVHSSQHGSTDYDPLQPRAS
EHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
LAADADAGGEQLHTVDGLIAFDYPGAHTVQADGRRYMQVRTEAHNVQRASHAATTNACGL
HCCCCCCCCCEEEEECCEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHCCCHHHHH
MVGALFRLRGFPRAELNQEYLVLSAHTTLAAPEHGSGEPPFSSSVQVMESRLPFRSLQRT
HHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
ATPTIAGLQTAVVTGDTDEDIAVDAHGRVQVTFHWATAARPHAAPSCWVRVASMWAGKGW
CCCCHHCCEEEEEECCCCCCEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCC
GAMSLPRVGQEVVVSFLEGDPDRPLIVGSVYNGDHAPPFSLPDNKTQSGVRSRSLLGGAA
CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DFNELRFDDKAGAEELYLRAQRDLREEVQHDHTSTIDNDRVLAVKHDRRARIDNNDSVEV
CHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
GKKLLLKAGEEIELVTGSARLVMKHNGEIVLSGIKILVDASSEAKITSTAIKLLANAQLQ
HHHHHHHCCCEEEEEECCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEE
AKSPATEVAGDATLKLTSGGMLSAEAGASATLKGPLVSIKADALVQVGGGLIMIG
CCCCCHHHCCCEEEEEECCCEEEECCCCCEEECCCEEEEECCEEEEECCCEEEEC
>Mature Secondary Structure 
PRTITLHSDLGERLLLHRMQASEALGQLFDYRIDALCTELQPNLRDLLGTPVAVQLADG
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECC
EGEQRWYHGMVASCAHNGYAVVDALDYAVLELQVVPKPWLLTQRRDCRIYQDMSVPEIVT
CCCHHHHHHHHHHHCCCCEEEEHHHCEEEEEEEECCCCCEECCCCCCEEECCCCHHHHHH
SVLGEIGYGDVQQQLSAQYAKRTYCVQYREDDFSFISRLLEREGIYYYFTHTRSAHTLVL
HHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCEEEEE
ADALGAHATKNGVDSLPYVPPGTDDRRLMRSVVSHWRSARGVHSSQHGSTDYDPLQPRAS
EHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
LAADADAGGEQLHTVDGLIAFDYPGAHTVQADGRRYMQVRTEAHNVQRASHAATTNACGL
HCCCCCCCCCEEEEECCEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHCCCHHHHH
MVGALFRLRGFPRAELNQEYLVLSAHTTLAAPEHGSGEPPFSSSVQVMESRLPFRSLQRT
HHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
ATPTIAGLQTAVVTGDTDEDIAVDAHGRVQVTFHWATAARPHAAPSCWVRVASMWAGKGW
CCCCHHCCEEEEEECCCCCCEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCC
GAMSLPRVGQEVVVSFLEGDPDRPLIVGSVYNGDHAPPFSLPDNKTQSGVRSRSLLGGAA
CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DFNELRFDDKAGAEELYLRAQRDLREEVQHDHTSTIDNDRVLAVKHDRRARIDNNDSVEV
CHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
GKKLLLKAGEEIELVTGSARLVMKHNGEIVLSGIKILVDASSEAKITSTAIKLLANAQLQ
HHHHHHHCCCEEEEEECCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEE
AKSPATEVAGDATLKLTSGGMLSAEAGASATLKGPLVSIKADALVQVGGGLIMIG
CCCCCHHHCCCEEEEEECCCEEEECCCCCEEECCCEEEEECCEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA