| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yaiN [C]
Identifier: 78049705
GI number: 78049705
Start: 4749166
End: 4749438
Strand: Reverse
Name: yaiN [C]
Synonym: XCV4149
Alternate gene names: 78049705
Gene position: 4749438-4749166 (Counterclockwise)
Preceding gene: 78049707
Following gene: 78049703
Centisome position: 91.72
GC content: 61.9
Gene sequence:
>273_bases GTGGCACATCTCAATCAGGACAAATCGAAACTGCTCGCGCGCGTGCGCAGGATCCGCGGGCAGGTGGAAGGGCTGGAAAA AGCCCTGGCGCAAGACGTGGACTGCACCGCGTTGCTGACCCAGGTGGCCGCATTTCGCGGCGCGGCGCAGGGCTTGATGG TCGAGTTGCTCAGCGAGCACCTGAAGCATCACGTGGCCGCGCCGGATGCATTGGGTGAGCGTGAGCTGGCAGTGGATGAC ATCACGGCCATCCTCAAGACCTATCTGAAGTAA
Upstream 100 bases:
>100_bases CTGCGCGCAATGCGGCGCAGCGTGCGTGGTCGACATCGGCGGTAGCTCTGGCTAAGGTACCCCCAGAGGGTATCCTAAAT ACCCCCAGGGGGTATATGGC
Downstream 100 bases:
>100_bases GCGCGGCCGATACACCATTGCGCTCACTCTCGGCCGGTTATGGTCCAGGCGCGCGGGACGGCCTGCATGGGCGTGTCGCG CCGCGTCGTCCTGATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPDALGERELAVDD ITAILKTYLK
Sequences:
>Translated_90_residues MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPDALGERELAVDD ITAILKTYLK >Mature_89_residues AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPDALGERELAVDDI TAILKTYLK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=44.5652173913043, Blast_Score=81, Evalue=1e-17, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=41.1111111111111, Blast_Score=69, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 9856; Mature: 9724
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LKHHVAAPDALGERELAVDDITAILKTYLK HHHHHCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LKHHVAAPDALGERELAVDDITAILKTYLK HHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA