Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is yaiN [C]

Identifier: 78049705

GI number: 78049705

Start: 4749166

End: 4749438

Strand: Reverse

Name: yaiN [C]

Synonym: XCV4149

Alternate gene names: 78049705

Gene position: 4749438-4749166 (Counterclockwise)

Preceding gene: 78049707

Following gene: 78049703

Centisome position: 91.72

GC content: 61.9

Gene sequence:

>273_bases
GTGGCACATCTCAATCAGGACAAATCGAAACTGCTCGCGCGCGTGCGCAGGATCCGCGGGCAGGTGGAAGGGCTGGAAAA
AGCCCTGGCGCAAGACGTGGACTGCACCGCGTTGCTGACCCAGGTGGCCGCATTTCGCGGCGCGGCGCAGGGCTTGATGG
TCGAGTTGCTCAGCGAGCACCTGAAGCATCACGTGGCCGCGCCGGATGCATTGGGTGAGCGTGAGCTGGCAGTGGATGAC
ATCACGGCCATCCTCAAGACCTATCTGAAGTAA

Upstream 100 bases:

>100_bases
CTGCGCGCAATGCGGCGCAGCGTGCGTGGTCGACATCGGCGGTAGCTCTGGCTAAGGTACCCCCAGAGGGTATCCTAAAT
ACCCCCAGGGGGTATATGGC

Downstream 100 bases:

>100_bases
GCGCGGCCGATACACCATTGCGCTCACTCTCGGCCGGTTATGGTCCAGGCGCGCGGGACGGCCTGCATGGGCGTGTCGCG
CCGCGTCGTCCTGATGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPDALGERELAVDD
ITAILKTYLK

Sequences:

>Translated_90_residues
MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPDALGERELAVDD
ITAILKTYLK
>Mature_89_residues
AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPDALGERELAVDDI
TAILKTYLK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=44.5652173913043, Blast_Score=81, Evalue=1e-17,
Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=41.1111111111111, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9856; Mature: 9724

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHHVAAPDALGERELAVDDITAILKTYLK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHHVAAPDALGERELAVDDITAILKTYLK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA