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The map label for this gene is 78049677

Identifier: 78049677

GI number: 78049677

Start: 4715669

End: 4716256

Strand: Reverse

Name: 78049677

Synonym: XCV4121

Alternate gene names: NA

Gene position: 4716256-4715669 (Counterclockwise)

Preceding gene: 78049678

Following gene: 78049675

Centisome position: 91.07

GC content: 64.63

Gene sequence:

>588_bases
ATGCGCACCCTGTTGTTTCTGATGCTTGGCAGCGTGTCTGCGATTGCCAACGCTGCGTCGCCTGCATCTGCATCTGCATC
TGCTGCCAGCGCAACGGCCACTGCCACTGCCACGCCTGAGCAGATCAAGCTGCAACTGCGCGAGTATTTCTTCGACGCCG
CGCGTGAGGGCCGCCAGGAGATGCTGGCCGAATTCATCCGTTCGCATTACGACCTCAATACCCGTGACGAGAAGGGCTAT
ACGGCCCTGATCCTGGCCGCATACCACGGCCAGCGGCCGGCGGTGGAGCAATTGCTGAGCGCCGGCGCCGATCCCTGTGC
GCAGGACAAGCGCGGCAACACCGCACTGATGGGCGCCATCTTCAAGGGCGAGCTGGGCATCGCCAAGCGCCTGATGCAGG
CCGATTGCGCGCCGGACCAGCGCAACAACGCCGGCCAGACCGCTGCGATGTATGCGGCGTTGTTCCAGCGCACCGACGTG
CTCAAGGACCTCGCCGCCAAGGGCGCGGATCTCAGCCTCAAGGACGGGCAGGGCAACGATGTGACCAAGCTACAACGCGG
CGAATTTGCCACCGTGCCGGCGCGCTGA

Upstream 100 bases:

>100_bases
TTGGCGCGGGTCAAGCAGTTGGCCTCCAGCCTGCAGGACTGATCCGCCCGACGACATCGCGGCCTGCGCCGCGGTGTCGT
CTTTACTTCGGGAGATCCCT

Downstream 100 bases:

>100_bases
GCGCGCCAGTCTTGCCTGCCAGGCGTGCCCCTGACAGCGTGCCGCATCGGCCGCTATGCGCGTCCGTGGTTGCGCTTCAC
TCACTAGAAGCAACGGGACG

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRTLLFLMLGSVSAIANAASPASASASAASATATATATPEQIKLQLREYFFDAAREGRQEMLAEFIRSHYDLNTRDEKGY
TALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDV
LKDLAAKGADLSLKDGQGNDVTKLQRGEFATVPAR

Sequences:

>Translated_195_residues
MRTLLFLMLGSVSAIANAASPASASASAASATATATATPEQIKLQLREYFFDAAREGRQEMLAEFIRSHYDLNTRDEKGY
TALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDV
LKDLAAKGADLSLKDGQGNDVTKLQRGEFATVPAR
>Mature_195_residues
MRTLLFLMLGSVSAIANAASPASASASAASATATATATPEQIKLQLREYFFDAAREGRQEMLAEFIRSHYDLNTRDEKGY
TALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDV
LKDLAAKGADLSLKDGQGNDVTKLQRGEFATVPAR

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI89363047, Length=127, Percent_Identity=33.0708661417323, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI225543463, Length=129, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI225543461, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI30425444, Length=124, Percent_Identity=34.6774193548387, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI268607595, Length=167, Percent_Identity=29.3413173652695, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI62988328, Length=167, Percent_Identity=29.3413173652695, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 20799; Mature: 20799

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLFLMLGSVSAIANAASPASASASAASATATATATPEQIKLQLREYFFDAAREGRQE
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MLAEFIRSHYDLNTRDEKGYTALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAI
HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH
FKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDVLKDLAAKGADLSLKDGQGND
HHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
VTKLQRGEFATVPAR
CHHCCCCCEECCCCC
>Mature Secondary Structure
MRTLLFLMLGSVSAIANAASPASASASAASATATATATPEQIKLQLREYFFDAAREGRQE
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MLAEFIRSHYDLNTRDEKGYTALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAI
HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH
FKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDVLKDLAAKGADLSLKDGQGND
HHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
VTKLQRGEFATVPAR
CHHCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]