Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

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The map label for this gene is ycbL [C]

Identifier: 78049653

GI number: 78049653

Start: 4694709

End: 4695731

Strand: Reverse

Name: ycbL [C]

Synonym: XCV4097

Alternate gene names: 78049653

Gene position: 4695731-4694709 (Counterclockwise)

Preceding gene: 78049654

Following gene: 78049652

Centisome position: 90.68

GC content: 65.59

Gene sequence:

>1023_bases
GTGCCTGTGGCGACATGCGCGACCGCGACGCCAGGCTTGGGCCTACACTGCAGTTCCGACAGCCGCCGCGGGGTGCGAAT
GACAGCGACAGCCGAGTTCAACATCCACACCATCGATACCGGCTTTGGCGGCGTGCAATTCGATGCGGCATATCTGGTGG
TCCAAGCGCAGCAGGCCGCCTTGATCGATTGCGGTACCTCGCTGTCGGTCCCGCAGATGCTGGCCGCGGTGCAGGCGGCC
GGCTTGGCGCCAGCGCAGGTGGAGTGGTTGATCCTGACCCATGTGCATCTGGATCATGCTGGCGGTGCAGGAGCCTTGTT
GTGGCATTTGCCCAATGCGCAGGTGCTGGTGCATCCGCGCGGTGCACCGCACCTGATCGACCCTGCGCGGCTGATTGCCG
GCGCCACCGCGGTGTATGGCGAGGCGGACATGGCGCGCCATTACGGCGTTATCGAGCCGGTGCCGGCCGAGCGTGTGGTC
GCGGCCGGCGAGGGTCATACCGTGATGCTGGGCAAGCGCGCGCTGCGCACCGTCGAGACGCCTGGACATGCGCGCCATCA
TCTATGCGTATGGGATGCGCGCAGCCGCAGCTGGTTCACCGGCGACACCTTCGGCCTGTCGTATCGCCAGTTGGACAGTG
CGCGTGGCGCTTTCATCGTGCCGACGTCCTCGCCGGTGCAATTCGAACCCGAGGCCATGCTGCAGTCGATCGCGCGCCTG
ATGGACGCCGCACCAGAGGCGATGTATCTGACCCATTACGGCCGTGTCACCTCGCCAGAACCGTTGGCGCGGGCGCTGGG
CGAGCAGATTCATGCGATGACCGACATTGCGCTGGGCTGCGCGCAGCGTCCGGACCGGCATCGCTGCATGGTGGCGGCAT
TGACCGAATTGTATCTGGAACGCGCACGCCAACATGGATGTCGGTTGGACGATGCCGCCGTGGAGCAACTGCTGGCAACG
GACATCGAACTCAACGCGCAAGGGCTGGGCTGTTGGCTGGATCGTGCAGCGCGCATGCGTTAG

Upstream 100 bases:

>100_bases
TGGATGCCGACGTGATTGTTGCCGCGATGGATGCCTTGCGCGAGGCGTGAGCTGCGCGGCGCAACAGGCGTCGAGGTGGG
TTGTTGCGGTTGCGTAGGTC

Downstream 100 bases:

>100_bases
CGCTGGTTGAGGGGTGACACACCCTCTCGAACGCTGTAGTGCGTGGTCGCGTCGTTCTGGTGCCGCTAAGGCCGGATCAG
TCGGGTGCGCGGTGCCCTCA

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase-Like; Beta-Lactamase Related Protein; Metallo-Beta-Lactamase Family Hydrolase; Metallo-Beta-Lactamase-Related Protein; Zn-Dependent Hydrolase Including Glyoxylase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase; Hydroxyacylglutathione Hydrolase; Zinc-Dependant Hydrolase; Metallo-Beta-Lactamase Related Protein; Metallo Beta-Lactamase Protein; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Zn-Dependent Hydrolases Including Glyoxylases

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPVATCATATPGLGLHCSSDSRRGVRMTATAEFNIHTIDTGFGGVQFDAAYLVVQAQQAALIDCGTSLSVPQMLAAVQAA
GLAPAQVEWLILTHVHLDHAGGAGALLWHLPNAQVLVHPRGAPHLIDPARLIAGATAVYGEADMARHYGVIEPVPAERVV
AAGEGHTVMLGKRALRTVETPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFIVPTSSPVQFEPEAMLQSIARL
MDAAPEAMYLTHYGRVTSPEPLARALGEQIHAMTDIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLAT
DIELNAQGLGCWLDRAARMR

Sequences:

>Translated_340_residues
MPVATCATATPGLGLHCSSDSRRGVRMTATAEFNIHTIDTGFGGVQFDAAYLVVQAQQAALIDCGTSLSVPQMLAAVQAA
GLAPAQVEWLILTHVHLDHAGGAGALLWHLPNAQVLVHPRGAPHLIDPARLIAGATAVYGEADMARHYGVIEPVPAERVV
AAGEGHTVMLGKRALRTVETPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFIVPTSSPVQFEPEAMLQSIARL
MDAAPEAMYLTHYGRVTSPEPLARALGEQIHAMTDIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLAT
DIELNAQGLGCWLDRAARMR
>Mature_339_residues
PVATCATATPGLGLHCSSDSRRGVRMTATAEFNIHTIDTGFGGVQFDAAYLVVQAQQAALIDCGTSLSVPQMLAAVQAAG
LAPAQVEWLILTHVHLDHAGGAGALLWHLPNAQVLVHPRGAPHLIDPARLIAGATAVYGEADMARHYGVIEPVPAERVVA
AGEGHTVMLGKRALRTVETPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFIVPTSSPVQFEPEAMLQSIARLM
DAAPEAMYLTHYGRVTSPEPLARALGEQIHAMTDIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATD
IELNAQGLGCWLDRAARMR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36575; Mature: 36444

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVATCATATPGLGLHCSSDSRRGVRMTATAEFNIHTIDTGFGGVQFDAAYLVVQAQQAA
CCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEEECCCCCEEECEEEEEEEECCCE
LIDCGTSLSVPQMLAAVQAAGLAPAQVEWLILTHVHLDHAGGAGALLWHLPNAQVLVHPR
EEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEECC
GAPHLIDPARLIAGATAVYGEADMARHYGVIEPVPAERVVAAGEGHTVMLGKRALRTVET
CCCCCCCHHHHHHCCHHHCCCHHHHHHCCCCCCCCHHHEEECCCCCEEEECHHHHHHCCC
PGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFIVPTSSPVQFEPEAMLQSIARL
CCCCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
MDAAPEAMYLTHYGRVTSPEPLARALGEQIHAMTDIALGCAQRPDRHRCMVAALTELYLE
HHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RARQHGCRLDDAAVEQLLATDIELNAQGLGCWLDRAARMR
HHHHCCCCCCHHHHHHHHHHCCEECCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PVATCATATPGLGLHCSSDSRRGVRMTATAEFNIHTIDTGFGGVQFDAAYLVVQAQQAA
CCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEEECCCCCEEECEEEEEEEECCCE
LIDCGTSLSVPQMLAAVQAAGLAPAQVEWLILTHVHLDHAGGAGALLWHLPNAQVLVHPR
EEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEECC
GAPHLIDPARLIAGATAVYGEADMARHYGVIEPVPAERVVAAGEGHTVMLGKRALRTVET
CCCCCCCHHHHHHCCHHHCCCHHHHHHCCCCCCCCHHHEEECCCCCEEEECHHHHHHCCC
PGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFIVPTSSPVQFEPEAMLQSIARL
CCCCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
MDAAPEAMYLTHYGRVTSPEPLARALGEQIHAMTDIALGCAQRPDRHRCMVAALTELYLE
HHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RARQHGCRLDDAAVEQLLATDIELNAQGLGCWLDRAARMR
HHHHCCCCCCHHHHHHHHHHCCEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA