| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049569
Identifier: 78049569
GI number: 78049569
Start: 4611182
End: 4611409
Strand: Reverse
Name: 78049569
Synonym: XCV4013
Alternate gene names: NA
Gene position: 4611409-4611182 (Counterclockwise)
Preceding gene: 78049570
Following gene: 78049566
Centisome position: 89.05
GC content: 63.6
Gene sequence:
>228_bases ATGACCGATCTGGTATTGCGTGACATCGACCCGGTGCTGGTGGACCGTATTCGCCGCATTTCCGTCGCACGGGGCTGGAC CCAGCACCAGACCGTCATGCATCTGCTCGAACAAGGCCTGTTCGCCAGCGAATACGAAGTCACCGGCGGCCTGCAGCACC CGGAGGTCGATGCCCTGGCCGAGGCGATTGCCGCGCTCAAGGCGCTGCCGGCGGGAAATAATCCCTAG
Upstream 100 bases:
>100_bases CTATGGCCGCGGCTATTGGCGCACGACAGGCGGCCGGATTGAAACGTCCGCCAAGGTTGCCGATGATGCGCGCGGAGCAG CGCATTGCACGAGGCAGGGC
Downstream 100 bases:
>100_bases CGCTGCCGCAGCTTCATCCCGGCCAGCACAGGCCAACGGGCTCACGCCGGATAGATCGCCCCCAACAGCCGAGGTCCGGC CGCCCCGGTCACCGCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MTDLVLRDIDPVLVDRIRRISVARGWTQHQTVMHLLEQGLFASEYEVTGGLQHPEVDALAEAIAALKALPAGNNP
Sequences:
>Translated_75_residues MTDLVLRDIDPVLVDRIRRISVARGWTQHQTVMHLLEQGLFASEYEVTGGLQHPEVDALAEAIAALKALPAGNNP >Mature_74_residues TDLVLRDIDPVLVDRIRRISVARGWTQHQTVMHLLEQGLFASEYEVTGGLQHPEVDALAEAIAALKALPAGNNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8230; Mature: 8098
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLVLRDIDPVLVDRIRRISVARGWTQHQTVMHLLEQGLFASEYEVTGGLQHPEVDALA CCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH EAIAALKALPAGNNP HHHHHHHHCCCCCCC >Mature Secondary Structure TDLVLRDIDPVLVDRIRRISVARGWTQHQTVMHLLEQGLFASEYEVTGGLQHPEVDALA CCCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH EAIAALKALPAGNNP HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA