| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is folB [H]
Identifier: 78049545
GI number: 78049545
Start: 4578961
End: 4579317
Strand: Reverse
Name: folB [H]
Synonym: XCV3989
Alternate gene names: 78049545
Gene position: 4579317-4578961 (Counterclockwise)
Preceding gene: 78049546
Following gene: 78049544
Centisome position: 88.43
GC content: 61.34
Gene sequence:
>357_bases ATGGATAAAGTGTTTATTGAAGGTCTCGATATCGATGCGCTGATCGGCATCTACGATTGGGAACGGCGCATCCGGCAGAC CTTGCGGTTCGATCTGGAAATGGGGTTCGACAACCGCATTCCGGCGGCCAGCGACGACATCGCCGATACGCTGAACTACA AGGCGGTGAGCAAGCGCTTGATCGAGTTCGTGCAAACCTCGGACTTCGGGCTGGTGGAGACGCTGGCCGAGCGCTGCGCG GCGCTCGTGCTGGACGAATTCGGCGTGCACTGGCTGCGTTTGAAGCTGAGCAAGCCGGGGGCGGTGCGCGGCGCGCAGGT GGTGGGCGTGATCATCGAACGGGAACGAGCGGTCTGA
Upstream 100 bases:
>100_bases GGGGAATCGGGAATAGTGAAGATCTTTACGCCGATCCTGTCCGTACGTGCGCTGTTGCCTTTGCTCCTCCCCATTGCCTA TTCCCGACTCCCGATTCCCC
Downstream 100 bases:
>100_bases TCGCCGCCTGCGCACCCGCCTGCCGGCCATTCACTCCATGGCGGAAGCCGGGAGGGCTGGAGGCGCCTGGCGGAGAGGGC TGCGCCGCTGCGGCATTCTG
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MDKVFIEGLDIDALIGIYDWERRIRQTLRFDLEMGFDNRIPAASDDIADTLNYKAVSKRLIEFVQTSDFGLVETLAERCA ALVLDEFGVHWLRLKLSKPGAVRGAQVVGVIIERERAV
Sequences:
>Translated_118_residues MDKVFIEGLDIDALIGIYDWERRIRQTLRFDLEMGFDNRIPAASDDIADTLNYKAVSKRLIEFVQTSDFGLVETLAERCA ALVLDEFGVHWLRLKLSKPGAVRGAQVVGVIIERERAV >Mature_118_residues MDKVFIEGLDIDALIGIYDWERRIRQTLRFDLEMGFDNRIPAASDDIADTLNYKAVSKRLIEFVQTSDFGLVETLAERCA ALVLDEFGVHWLRLKLSKPGAVRGAQVVGVIIERERAV
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=114, Percent_Identity=52.6315789473684, Blast_Score=120, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13381; Mature: 13381
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVFIEGLDIDALIGIYDWERRIRQTLRFDLEMGFDNRIPAASDDIADTLNYKAVSKRL CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH IEFVQTSDFGLVETLAERCAALVLDEFGVHWLRLKLSKPGAVRGAQVVGVIIERERAV HHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHEECCCCCC >Mature Secondary Structure MDKVFIEGLDIDALIGIYDWERRIRQTLRFDLEMGFDNRIPAASDDIADTLNYKAVSKRL CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH IEFVQTSDFGLVETLAERCAALVLDEFGVHWLRLKLSKPGAVRGAQVVGVIIERERAV HHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]