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The map label for this gene is 78049478

Identifier: 78049478

GI number: 78049478

Start: 4501030

End: 4502307

Strand: Reverse

Name: 78049478

Synonym: XCV3922

Alternate gene names: NA

Gene position: 4502307-4501030 (Counterclockwise)

Preceding gene: 78049479

Following gene: 78049476

Centisome position: 86.94

GC content: 68.23

Gene sequence:

>1278_bases
ATGAATTCCTTGCGTCCCCAACCCGCGTCACTGTCGCCCTCTGCCCCGACCACCTCGCGGGCAGGCGTGCGCATTGCCGA
GCTGGGCGCGTTCGCATTGACTGCGCTGGTGGTGAGCATGCCGAGCGGGTTGCTGCCGTTCGGCCTGTGCCTGCTGCTTA
GTTCGTTGATGGGCTGGCGCAGCTTGCGTGAGGCCATTGCCGCGCGCGAGTGGTCGTTGCGCGTGGTGGGCTGGCTGACG
GTGGCGGTGATTGCGATGTCGCTGCTGTCGATCGCGTTGTTCGAGCACGGGCTGCGCGATGTGGGCAATCGCTCGCGCTT
CCTGGTGCTGCCTTGGGCGGCGCTGTGGGCCTATGCGTTGCAGCCGCGCCAGCTGTGGTTGTGGCGCGGTGCCTTGGTCG
GCGTGTTTGCGGCCATGCTGATCGCGCTGCTGCAGGTGATGAACGGTGCCGACCGCGCCGAAGGCTTCACCAACGCCATT
GTGTTTGCCGACATCGTGCTGATGTTGCTGGTGGTGGCGGTGTTCTGCCGCCCGCTCGGCAGCGTGCGCTGGCTGGTGGG
CGCTGGGGTCGCCAGCGTGGTGGTGATCGTGCTCAGCGGCAGCCGCGGGGTGTGGCTGGCGATGCTGGCCACGCTGGGCG
TGCTGATCTGGGGTGCGCCCTGGCACAGCACGCGCGTGCGCCTGCTGACCTTCATCGGCGGCGCGGTGCTGGCGGTGGGC
GTCGCGCTCAGCGTGCCGGCGCTGACCGATCAGATGCGCCTGGGCGAATTGCAGCGCGACCTGCAGCGTTACGAAGTGGG
CGACACCGATTCGTCGGCCGGTGCCCGTATCGAACGCCTGCATGTGGCTTGGGACACGGTGACGGCGCATCCGCTGACCG
GTGTGGGCGTTGGGCGTTTCGACGATGCGATGCACGACCTGCCGGCCTGTGCCGCCGACCCGTCGTTGTTCCGTTGCCAG
TTGGGGCATGCGCACAACGATCTGGCCGAATGGAGTGCCACCCAGGGCGTGCCCGGGCTGTTGCTGCTGCTTGCCGTCTA
CGGCGTGCCGCTGTGGATGTTCGTGCGACTGCATCGGCGCAGCGGGCAGCAGCAGTTCCGCGGCCCGGCGGCGGCCGGGG
TGATGCTCGTGATCAGTTATGCCTTGTGCGGCCTGACCCAATCGATGTTCGCGCACCAGGTGGCGGCGAGCTTCTACACG
GCCATGGTCGGCGTGCTGGTGGGTCTGTCGGCGCGGCAGGCGCAACAGGTGCAGTCGGACGTGGCACGCGCTCGATAG

Upstream 100 bases:

>100_bases
GGTCGCCGTCTAGCAGGGATTCATGCGTCGCATCGTTAGCTTGGCCGGCGCTGCCGAAGCCCGCGCACTGCGTCGCCTCC
CTTTTCCCACCGATTTGTAG

Downstream 100 bases:

>100_bases
CGGCGGATGATCCACCGGCTGCATGTGGCGCATGCCCCGGCAGCGCGCTTTCGGTGCCTGGGCACACGCCCGTGCACAAA
CAGAAGGGGGGCGATCGTTG

Product: putative cell surface polysaccharide polymerase/ligase

Products: NA

Alternate protein names: O-Antigen Polymerase; O-Antigen Polymerase Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNSLRPQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLSSLMGWRSLREAIAAREWSLRVVGWLT
VAVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQLWLWRGALVGVFAAMLIALLQVMNGADRAEGFTNAI
VFADIVLMLLVVAVFCRPLGSVRWLVGAGVASVVVIVLSGSRGVWLAMLATLGVLIWGAPWHSTRVRLLTFIGGAVLAVG
VALSVPALTDQMRLGELQRDLQRYEVGDTDSSAGARIERLHVAWDTVTAHPLTGVGVGRFDDAMHDLPACAADPSLFRCQ
LGHAHNDLAEWSATQGVPGLLLLLAVYGVPLWMFVRLHRRSGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYT
AMVGVLVGLSARQAQQVQSDVARAR

Sequences:

>Translated_425_residues
MNSLRPQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLSSLMGWRSLREAIAAREWSLRVVGWLT
VAVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQLWLWRGALVGVFAAMLIALLQVMNGADRAEGFTNAI
VFADIVLMLLVVAVFCRPLGSVRWLVGAGVASVVVIVLSGSRGVWLAMLATLGVLIWGAPWHSTRVRLLTFIGGAVLAVG
VALSVPALTDQMRLGELQRDLQRYEVGDTDSSAGARIERLHVAWDTVTAHPLTGVGVGRFDDAMHDLPACAADPSLFRCQ
LGHAHNDLAEWSATQGVPGLLLLLAVYGVPLWMFVRLHRRSGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYT
AMVGVLVGLSARQAQQVQSDVARAR
>Mature_425_residues
MNSLRPQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLSSLMGWRSLREAIAAREWSLRVVGWLT
VAVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQLWLWRGALVGVFAAMLIALLQVMNGADRAEGFTNAI
VFADIVLMLLVVAVFCRPLGSVRWLVGAGVASVVVIVLSGSRGVWLAMLATLGVLIWGAPWHSTRVRLLTFIGGAVLAVG
VALSVPALTDQMRLGELQRDLQRYEVGDTDSSAGARIERLHVAWDTVTAHPLTGVGVGRFDDAMHDLPACAADPSLFRCQ
LGHAHNDLAEWSATQGVPGLLLLLAVYGVPLWMFVRLHRRSGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYT
AMVGVLVGLSARQAQQVQSDVARAR

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45598; Mature: 45598

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLRPQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLSSLMGWR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLREAIAAREWSLRVVGWLTVAVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHC
QPRQLWLWRGALVGVFAAMLIALLQVMNGADRAEGFTNAIVFADIVLMLLVVAVFCRPLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVRWLVGAGVASVVVIVLSGSRGVWLAMLATLGVLIWGAPWHSTRVRLLTFIGGAVLAVG
HHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VALSVPALTDQMRLGELQRDLQRYEVGDTDSSAGARIERLHVAWDTVTAHPLTGVGVGRF
HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCHH
DDAMHDLPACAADPSLFRCQLGHAHNDLAEWSATQGVPGLLLLLAVYGVPLWMFVRLHRR
HHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYTAMVGVLVGLSARQAQQVQSD
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VARAR
HHHCC
>Mature Secondary Structure
MNSLRPQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLSSLMGWR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLREAIAAREWSLRVVGWLTVAVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHC
QPRQLWLWRGALVGVFAAMLIALLQVMNGADRAEGFTNAIVFADIVLMLLVVAVFCRPLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVRWLVGAGVASVVVIVLSGSRGVWLAMLATLGVLIWGAPWHSTRVRLLTFIGGAVLAVG
HHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VALSVPALTDQMRLGELQRDLQRYEVGDTDSSAGARIERLHVAWDTVTAHPLTGVGVGRF
HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCHH
DDAMHDLPACAADPSLFRCQLGHAHNDLAEWSATQGVPGLLLLLAVYGVPLWMFVRLHRR
HHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYTAMVGVLVGLSARQAQQVQSD
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VARAR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA