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The map label for this gene is 78049382

Identifier: 78049382

GI number: 78049382

Start: 4410496

End: 4411740

Strand: Reverse

Name: 78049382

Synonym: XCV3826

Alternate gene names: NA

Gene position: 4411740-4410496 (Counterclockwise)

Preceding gene: 78049383

Following gene: 78049381

Centisome position: 85.19

GC content: 63.21

Gene sequence:

>1245_bases
GTGAAAATCCTCGACAAGCTCGCCGTCCTCGCCGACGCCGCCAAATACGATGCCTCCTGTGCTTCCAGTGGCGCCAACAA
GCGCAACTCGCTGGGCACCGGCGGCATCGGCAGCACCGAGGGCATGGGCATCTGCCACTCGTACACGCCCGATGGCAGAT
GCGTGTCGCTGTTGAAGATCCTGCTGACCAATTTTTGCATCTTCGACTGCGCGTACTGCGTCAATCGCGTGTCCAGCAAT
GTGCGCCGTGCGCGCTTCACGCCGGAGGAAGTGGTCACGCTCACGCTGGATTTCTACAAGCGCAACTACATCGAAGGCTT
GTTTCTCTCCAGCGGCATCATCCGCAACTCCGACTACACCATGGAGCAACTGGTGGAAGTGGCGCGGCAGCTGCGCGAGG
TGCACCATTTCGCCGGTTACATCCATCTCAAGACCATCCCGGATGCGGCCCCGGAGTTGCTGGCAGCGGCCGGACGCTAT
GCCGATCGCTTGAGCATCAATGTGGAGTTGCCCACCGAACAGGGCCTGACGCTGCTGGCGCCGGAAAAAAGCGTGGGCGG
CATTCGCTCGGCGATGGGCGAGTTGCGCTGGCGCATCGAAGAGAACCAGCTCGAACGCAAGGCCGAAACGGTGCGCCGCG
CCAAGCCGCCACGCTTTGCACCGGCCGGGCAGAGCACGCAGATGATCGTCGGCGCCGACAATGCCAACGACCGCAGCATT
CTGGACACCAGCCACAACCTCTACGGCAATTACCGCATGCGCCGGGTGTATTACTCGGCCTTCAGCCCCATCCCGGACGC
CTCGTCCAAGCTGCCGTTGCAGGCGCCGCCCCTGCAGCGCGAGCACCGGCTGTACCAGGCCGACTGGTTGCTGCGTTTCT
ACGAGTTCAGCGTGGAAGACATTGCGCCGGCGCAGTCCAGCGGCATGCTCGACCTGGACGTGGACCCCAAGCTGGCCTGG
GCATTGCGCAATCCCGAGCGGTTTCCGGTGGATCTGAATGCGGCACCGCGCGAAATGCTGCTGCGCGTACCGGGCCTGGG
CACGCGCAACGTGGAGCGTCTGTTGTTGTCGCGGCGGCATGCGCGCTTGCGGGTTGGGGATCTGGCACGGCTGCGCGTGC
CAATGAAGAAGTTGCTGCCGTTTGTGAGTGTGCTGGATCATCATCCGCGTCAACGCTTGGATGATCCTGTGCGGTTGCGG
GCGCAATTGGCACCTGCGCCTAGGCAGGCGGGGTTGTTTGATTAG

Upstream 100 bases:

>100_bases
CGAGCGGCCGGATCGCGCCAACCCGCAGCGCTCTGAAGCATTCACGATCGGGTGCATGCGAGTCTCATAGGCTGAGACGC
CACCGCTGCATGCTGCCCGC

Downstream 100 bases:

>100_bases
TGCCTCTGCGATAAGGCCGCACCGGTCCCCTGCGCTCCTTGCCACGCGCGGCACGGCGCCCAAACTCGCTACGCTCAAAC
AAGGGCGCCTCTTCGGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKILDKLAVLADAAKYDASCASSGANKRNSLGTGGIGSTEGMGICHSYTPDGRCVSLLKILLTNFCIFDCAYCVNRVSSN
VRRARFTPEEVVTLTLDFYKRNYIEGLFLSSGIIRNSDYTMEQLVEVARQLREVHHFAGYIHLKTIPDAAPELLAAAGRY
ADRLSINVELPTEQGLTLLAPEKSVGGIRSAMGELRWRIEENQLERKAETVRRAKPPRFAPAGQSTQMIVGADNANDRSI
LDTSHNLYGNYRMRRVYYSAFSPIPDASSKLPLQAPPLQREHRLYQADWLLRFYEFSVEDIAPAQSSGMLDLDVDPKLAW
ALRNPERFPVDLNAAPREMLLRVPGLGTRNVERLLLSRRHARLRVGDLARLRVPMKKLLPFVSVLDHHPRQRLDDPVRLR
AQLAPAPRQAGLFD

Sequences:

>Translated_414_residues
MKILDKLAVLADAAKYDASCASSGANKRNSLGTGGIGSTEGMGICHSYTPDGRCVSLLKILLTNFCIFDCAYCVNRVSSN
VRRARFTPEEVVTLTLDFYKRNYIEGLFLSSGIIRNSDYTMEQLVEVARQLREVHHFAGYIHLKTIPDAAPELLAAAGRY
ADRLSINVELPTEQGLTLLAPEKSVGGIRSAMGELRWRIEENQLERKAETVRRAKPPRFAPAGQSTQMIVGADNANDRSI
LDTSHNLYGNYRMRRVYYSAFSPIPDASSKLPLQAPPLQREHRLYQADWLLRFYEFSVEDIAPAQSSGMLDLDVDPKLAW
ALRNPERFPVDLNAAPREMLLRVPGLGTRNVERLLLSRRHARLRVGDLARLRVPMKKLLPFVSVLDHHPRQRLDDPVRLR
AQLAPAPRQAGLFD
>Mature_414_residues
MKILDKLAVLADAAKYDASCASSGANKRNSLGTGGIGSTEGMGICHSYTPDGRCVSLLKILLTNFCIFDCAYCVNRVSSN
VRRARFTPEEVVTLTLDFYKRNYIEGLFLSSGIIRNSDYTMEQLVEVARQLREVHHFAGYIHLKTIPDAAPELLAAAGRY
ADRLSINVELPTEQGLTLLAPEKSVGGIRSAMGELRWRIEENQLERKAETVRRAKPPRFAPAGQSTQMIVGADNANDRSI
LDTSHNLYGNYRMRRVYYSAFSPIPDASSKLPLQAPPLQREHRLYQADWLLRFYEFSVEDIAPAQSSGMLDLDVDPKLAW
ALRNPERFPVDLNAAPREMLLRVPGLGTRNVERLLLSRRHARLRVGDLARLRVPMKKLLPFVSVLDHHPRQRLDDPVRLR
AQLAPAPRQAGLFD

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46489; Mature: 46489

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00260 GLUCAGON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILDKLAVLADAAKYDASCASSGANKRNSLGTGGIGSTEGMGICHSYTPDGRCVSLLKI
CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
LLTNFCIFDCAYCVNRVSSNVRRARFTPEEVVTLTLDFYKRNYIEGLFLSSGIIRNSDYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHHHHHHHHHHCCCEEECCCCC
MEQLVEVARQLREVHHFAGYIHLKTIPDAAPELLAAAGRYADRLSINVELPTEQGLTLLA
HHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCHHEEEEEEECCCCCCCEEEC
PEKSVGGIRSAMGELRWRIEENQLERKAETVRRAKPPRFAPAGQSTQMIVGADNANDRSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCE
LDTSHNLYGNYRMRRVYYSAFSPIPDASSKLPLQAPPLQREHRLYQADWLLRFYEFSVED
ECCCCCHHCCCHHHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH
IAPAQSSGMLDLDVDPKLAWALRNPERFPVDLNAAPREMLLRVPGLGTRNVERLLLSRRH
CCCCCCCCEEEECCCCCEEEEECCCCCCCEECCCCCHHHHEECCCCCCHHHHHHHHHHHH
ARLRVGDLARLRVPMKKLLPFVSVLDHHPRQRLDDPVRLRAQLAPAPRQAGLFD
HHCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKILDKLAVLADAAKYDASCASSGANKRNSLGTGGIGSTEGMGICHSYTPDGRCVSLLKI
CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
LLTNFCIFDCAYCVNRVSSNVRRARFTPEEVVTLTLDFYKRNYIEGLFLSSGIIRNSDYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHHHHHHHHHHCCCEEECCCCC
MEQLVEVARQLREVHHFAGYIHLKTIPDAAPELLAAAGRYADRLSINVELPTEQGLTLLA
HHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCHHEEEEEEECCCCCCCEEEC
PEKSVGGIRSAMGELRWRIEENQLERKAETVRRAKPPRFAPAGQSTQMIVGADNANDRSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCE
LDTSHNLYGNYRMRRVYYSAFSPIPDASSKLPLQAPPLQREHRLYQADWLLRFYEFSVED
ECCCCCHHCCCHHHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH
IAPAQSSGMLDLDVDPKLAWALRNPERFPVDLNAAPREMLLRVPGLGTRNVERLLLSRRH
CCCCCCCCEEEECCCCCEEEEECCCCCCCEECCCCCHHHHEECCCCCCHHHHHHHHHHHH
ARLRVGDLARLRVPMKKLLPFVSVLDHHPRQRLDDPVRLRAQLAPAPRQAGLFD
HHCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA