| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049204
Identifier: 78049204
GI number: 78049204
Start: 4199815
End: 4200783
Strand: Reverse
Name: 78049204
Synonym: XCV3648
Alternate gene names: NA
Gene position: 4200783-4199815 (Counterclockwise)
Preceding gene: 78049205
Following gene: 78049203
Centisome position: 81.12
GC content: 66.56
Gene sequence:
>969_bases ATGTTCAAGCGCGTTCTAAGCGTCGCAACGTTGATCGGCGTGTGTCTGCTGGCAAACGGCTGCAATGCCGCCGCGCCGAC CTGGATGGGCGCCAACGTCAAGGTGTCCGCCAACGCCCCGTGGGAAAGTCAGGCTGCAGCGCAGTCGCTGGACGCACTGG CCAAGACGGGGGCCAGCAAGGCGTTGCTGGTAGCGTTCGTGTGGCAGGCCAACCCGCAGTCCAACGACCCGGTGCTGGGC AGCGACAGCAGTGTGGACGCCATGCGCGCTGCGTTGCGGCAAAGCCTGCAGGCTGGATTGCAGCCGACGCTCAAGGTGCA TGTCTGGATTCCGGGACACTGGGCCGGCGATGCCGCGCCCACCAACCCGGCGGCGTGGTTTGCGGCCTACCAGCAGGCAT TGCTGCCATTGGCCAGGTTGGCCCAGGACGAACACGCCGAAGCGTTGGTGATCGGCACCGAGTTGCGCAAGTTGCAGGAC GCGCCGCAATGGCCGGCGTTGGTCGCGGCAGTGCGCAAGGTCTACCACGGAAAACTGCTGTATGTGGCCGACGGTATGGA GCATGCCGAGAGCTTCCGTTACTGGTCGTTGTTCGATGCGGTGGGCACCAGCCTGTATCCGCGCCTGTCCGAAGCTGCCG ATGCACGCAGCGCTGAAATGACCGCTGCGGCGCAACGCCTGCAGCAGTTGGGTCAGCGCGTGGGCAAGCCGGTGTGGGTG GCCGAGCTGGGGTTGCGTTCGGCGCGCGGTAGTCTGGCGGCGCCGTGGGAAAGCCCGGAGCAGCGCACGGCTGCCGTCGA TACGCGCCTACAGCTGCAGGTGTTGCAGCAGTGGCGCAAGGTACTGCAGGCGCATGGCGTGGAAGGCATTGCGCTGTGGT GCTGGTATACCGACCCCAAGGCCGGCGGCCCGGGCGACAGCGATTTCACCGTGCAAGGCAAGCCGGCGCAGCAGGTGCTG GCGCGCTGA
Upstream 100 bases:
>100_bases CAGCGGTCACGGCGGTGCCGCAGGACAAGAACAGTGCATCCTTGCGTGCGACGGCGTGCTCCCGGCACGCGGCGCCGCCG AATGCCGAGGTGTCTGCTGC
Downstream 100 bases:
>100_bases GGGCGACTGGCGAACAGCTGCGTTCGCCGCAGCGGCGGGGTGCGGCCAGTGCCCGGGATCGCCAGAACCCGCTCGCACGC TTGGGCTTCTGGCGCCGGCC
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MFKRVLSVATLIGVCLLANGCNAAAPTWMGANVKVSANAPWESQAAAQSLDALAKTGASKALLVAFVWQANPQSNDPVLG SDSSVDAMRAALRQSLQAGLQPTLKVHVWIPGHWAGDAAPTNPAAWFAAYQQALLPLARLAQDEHAEALVIGTELRKLQD APQWPALVAAVRKVYHGKLLYVADGMEHAESFRYWSLFDAVGTSLYPRLSEAADARSAEMTAAAQRLQQLGQRVGKPVWV AELGLRSARGSLAAPWESPEQRTAAVDTRLQLQVLQQWRKVLQAHGVEGIALWCWYTDPKAGGPGDSDFTVQGKPAQQVL AR
Sequences:
>Translated_322_residues MFKRVLSVATLIGVCLLANGCNAAAPTWMGANVKVSANAPWESQAAAQSLDALAKTGASKALLVAFVWQANPQSNDPVLG SDSSVDAMRAALRQSLQAGLQPTLKVHVWIPGHWAGDAAPTNPAAWFAAYQQALLPLARLAQDEHAEALVIGTELRKLQD APQWPALVAAVRKVYHGKLLYVADGMEHAESFRYWSLFDAVGTSLYPRLSEAADARSAEMTAAAQRLQQLGQRVGKPVWV AELGLRSARGSLAAPWESPEQRTAAVDTRLQLQVLQQWRKVLQAHGVEGIALWCWYTDPKAGGPGDSDFTVQGKPAQQVL AR >Mature_322_residues MFKRVLSVATLIGVCLLANGCNAAAPTWMGANVKVSANAPWESQAAAQSLDALAKTGASKALLVAFVWQANPQSNDPVLG SDSSVDAMRAALRQSLQAGLQPTLKVHVWIPGHWAGDAAPTNPAAWFAAYQQALLPLARLAQDEHAEALVIGTELRKLQD APQWPALVAAVRKVYHGKLLYVADGMEHAESFRYWSLFDAVGTSLYPRLSEAADARSAEMTAAAQRLQQLGQRVGKPVWV AELGLRSARGSLAAPWESPEQRTAAVDTRLQLQVLQQWRKVLQAHGVEGIALWCWYTDPKAGGPGDSDFTVQGKPAQQVL AR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34656; Mature: 34656
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRVLSVATLIGVCLLANGCNAAAPTWMGANVKVSANAPWESQAAAQSLDALAKTGASK CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC ALLVAFVWQANPQSNDPVLGSDSSVDAMRAALRQSLQAGLQPTLKVHVWIPGHWAGDAAP EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC TNPAAWFAAYQQALLPLARLAQDEHAEALVIGTELRKLQDAPQWPALVAAVRKVYHGKLL CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEE YVADGMEHAESFRYWSLFDAVGTSLYPRLSEAADARSAEMTAAAQRLQQLGQRVGKPVWV EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE AELGLRSARGSLAAPWESPEQRTAAVDTRLQLQVLQQWRKVLQAHGVEGIALWCWYTDPK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC AGGPGDSDFTVQGKPAQQVLAR CCCCCCCCEEECCCCHHHHHCC >Mature Secondary Structure MFKRVLSVATLIGVCLLANGCNAAAPTWMGANVKVSANAPWESQAAAQSLDALAKTGASK CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC ALLVAFVWQANPQSNDPVLGSDSSVDAMRAALRQSLQAGLQPTLKVHVWIPGHWAGDAAP EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC TNPAAWFAAYQQALLPLARLAQDEHAEALVIGTELRKLQDAPQWPALVAAVRKVYHGKLL CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEE YVADGMEHAESFRYWSLFDAVGTSLYPRLSEAADARSAEMTAAAQRLQQLGQRVGKPVWV EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE AELGLRSARGSLAAPWESPEQRTAAVDTRLQLQVLQQWRKVLQAHGVEGIALWCWYTDPK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC AGGPGDSDFTVQGKPAQQVLAR CCCCCCCCEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA