| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049202
Identifier: 78049202
GI number: 78049202
Start: 4197580
End: 4198035
Strand: Reverse
Name: 78049202
Synonym: XCV3646
Alternate gene names: NA
Gene position: 4198035-4197580 (Counterclockwise)
Preceding gene: 78049203
Following gene: 78049201
Centisome position: 81.07
GC content: 67.76
Gene sequence:
>456_bases ATGAGCGCACTCGACCCGCTGCCGCTATACCGTACGCGCAGTTGCTCCCGGCAATGGCTGGGGTTTGTGCGCGCGATGGC CGAGGAGTTCGGCGCCGAGTTGCCCGAGGACGATCTGGCCCTGTTGATGGCGCGAATCGGCCAGCGCTTCGCACGCGAAC AGCGGCTTGCGCCGTGCGCCACGCTGGACGACGCGCAGCTCGCGGCCAATGCGGTCTGGGACCGCTGCGATTGGGGCCAG TGCGTGTTGGAGGAATACACCGACCATGTGCAGATCCGGCACGCGGGGGCGCCGTTGAGCGTCGCGCTGAATGGCGCCGC GTGGAGCGATGGGTTTTTGCAGGGTGTCTACGAGGGGTGGTTTCAGCAACTGGGGATGCTGGCGGGTCTGGCGGTGCAGA GCGTGCCGAGCGACACCGTCGATCTGCGCCGCCTGGTGTTGGCGCGCACGGCATGA
Upstream 100 bases:
>100_bases CGATTCGAGGATGGCGGCCGCTAACATGTCATCACGCATGCATCACATCGGGTGCATGCGTCGCATGTGACGGCCCTTTT TTCCTTGCGAAGTCTGTTGA
Downstream 100 bases:
>100_bases GCATGTCTGATCGGGCAAGGAGAGTGTGATGACAGCAAGGAAGGGCAAGGACGCACCCCAACATGACGATGTGTCGGGCC TGTTCGCGCGTTTGGGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSALDPLPLYRTRSCSRQWLGFVRAMAEEFGAELPEDDLALLMARIGQRFAREQRLAPCATLDDAQLAANAVWDRCDWGQ CVLEEYTDHVQIRHAGAPLSVALNGAAWSDGFLQGVYEGWFQQLGMLAGLAVQSVPSDTVDLRRLVLARTA
Sequences:
>Translated_151_residues MSALDPLPLYRTRSCSRQWLGFVRAMAEEFGAELPEDDLALLMARIGQRFAREQRLAPCATLDDAQLAANAVWDRCDWGQ CVLEEYTDHVQIRHAGAPLSVALNGAAWSDGFLQGVYEGWFQQLGMLAGLAVQSVPSDTVDLRRLVLARTA >Mature_150_residues SALDPLPLYRTRSCSRQWLGFVRAMAEEFGAELPEDDLALLMARIGQRFAREQRLAPCATLDDAQLAANAVWDRCDWGQC VLEEYTDHVQIRHAGAPLSVALNGAAWSDGFLQGVYEGWFQQLGMLAGLAVQSVPSDTVDLRRLVLARTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16708; Mature: 16577
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALDPLPLYRTRSCSRQWLGFVRAMAEEFGAELPEDDLALLMARIGQRFAREQRLAPCA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TLDDAQLAANAVWDRCDWGQCVLEEYTDHVQIRHAGAPLSVALNGAAWSDGFLQGVYEGW CCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHHHHH FQQLGMLAGLAVQSVPSDTVDLRRLVLARTA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SALDPLPLYRTRSCSRQWLGFVRAMAEEFGAELPEDDLALLMARIGQRFAREQRLAPCA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TLDDAQLAANAVWDRCDWGQCVLEEYTDHVQIRHAGAPLSVALNGAAWSDGFLQGVYEGW CCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHHHHH FQQLGMLAGLAVQSVPSDTVDLRRLVLARTA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA