| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048970
Identifier: 78048970
GI number: 78048970
Start: 3901466
End: 3902203
Strand: Reverse
Name: 78048970
Synonym: XCV3414
Alternate gene names: NA
Gene position: 3902203-3901466 (Counterclockwise)
Preceding gene: 78048971
Following gene: 78048969
Centisome position: 75.35
GC content: 65.18
Gene sequence:
>738_bases ATGGCGCCGGCCGGCCTGTTCGGTGTGGATTGGACTGCAGGCGACCTGGTGTTCGGTGGTTTTGCCGGTTTCGGCCGCAT GGACGCCGACTTCGGTAACCGCAACAGCAGCTTCAAGCAGGACGACACCACCCTGGGCGGCTTCTTCGGCTGGTACACCG GCCCGGTGTGGGTCAATGCGCAGGTCAGCTACAGCTGGCTGAGCTACGACGTGGACCGCGAAGTCCAGCTTGGGCCAGCC ACCCGCGTGCACAGCGGCTCCCCCGACGGCAGCAACCTCACCGCCGCCCTCAACGCCGGGTATTCGCTGGGCGAAGGCAA CCTCAAGTACGGCCCGGTGGCCGGCCTGACCTGGCAGAAGATCAAGCTCGACGGCTATACCGAAAGCAACGACAGCGCCA CCGCGCTGGGCTACGCCAATCAGGACATCGATTCGCTGGTGGGCCGCGTTGGCTTCCAGGTGCATCTGGACGGCGCCATG GTCAAGCCGTACCTGCAGGCAACCTACGACCACGAGTTCAAGGACGGCGGCGAAGCCAGCGCCTGGCTGCAGTCGATGCC GGAAGTGGGCATGTACACCGTTCCTGGCCAGAACTTCGATCGCAACTACGCCACTGTCGTCCTGGGTGCCCGCACCGGGC TGTGGGGCTTGCAGAGCAACATCGGCCTGAGCACCACCACCGCCCAGCGCAGTGCCCGCGACGCGACCTTGTTCGTGAAC TTCAGCGGCAACTTCTGA
Upstream 100 bases:
>100_bases CTGGCATCTGGACGGCAAGCCGGACGCCGACGGCATGCGTTGGTGGGGCAGCGTGCGCGGCGACATGTAGCGTTACGACC ACGCGGACCTGTACGACGGC
Downstream 100 bases:
>100_bases GGCGCGGCTAGCCACAGATAGTTCACACGCAACATCTGAGGGCCGGGCAACCGGCCCTCGTTCTATCTGCGCACATTGCG CCGGACACCTGCGCCCGCAT
Product: putative esterase (fragment)
Products: NA
Alternate protein names: Lipase/Esterase; Outer Membrane Autotransporter Barrel Domain Protein; Triacylglycerol Lipase/Esterase Protein; Hemagglutinin-Related Protein; Outer Membrane Esterase; EstA Protein; Outer Membrane Lipase/Esterase; Lipase; Outer Membrane Autotransporter; Autotransporter Carboxylic Ester Hydrolase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAPAGLFGVDWTAGDLVFGGFAGFGRMDADFGNRNSSFKQDDTTLGGFFGWYTGPVWVNAQVSYSWLSYDVDREVQLGPA TRVHSGSPDGSNLTAALNAGYSLGEGNLKYGPVAGLTWQKIKLDGYTESNDSATALGYANQDIDSLVGRVGFQVHLDGAM VKPYLQATYDHEFKDGGEASAWLQSMPEVGMYTVPGQNFDRNYATVVLGARTGLWGLQSNIGLSTTTAQRSARDATLFVN FSGNF
Sequences:
>Translated_245_residues MAPAGLFGVDWTAGDLVFGGFAGFGRMDADFGNRNSSFKQDDTTLGGFFGWYTGPVWVNAQVSYSWLSYDVDREVQLGPA TRVHSGSPDGSNLTAALNAGYSLGEGNLKYGPVAGLTWQKIKLDGYTESNDSATALGYANQDIDSLVGRVGFQVHLDGAM VKPYLQATYDHEFKDGGEASAWLQSMPEVGMYTVPGQNFDRNYATVVLGARTGLWGLQSNIGLSTTTAQRSARDATLFVN FSGNF >Mature_244_residues APAGLFGVDWTAGDLVFGGFAGFGRMDADFGNRNSSFKQDDTTLGGFFGWYTGPVWVNAQVSYSWLSYDVDREVQLGPAT RVHSGSPDGSNLTAALNAGYSLGEGNLKYGPVAGLTWQKIKLDGYTESNDSATALGYANQDIDSLVGRVGFQVHLDGAMV KPYLQATYDHEFKDGGEASAWLQSMPEVGMYTVPGQNFDRNYATVVLGARTGLWGLQSNIGLSTTTAQRSARDATLFVNF SGNF
Specific function: Unknown
COG id: COG5571
COG function: function code N; Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26296; Mature: 26165
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAGLFGVDWTAGDLVFGGFAGFGRMDADFGNRNSSFKQDDTTLGGFFGWYTGPVWVNA CCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCHHEECCCEEEEE QVSYSWLSYDVDREVQLGPATRVHSGSPDGSNLTAALNAGYSLGEGNLKYGPVAGLTWQK EEEEEEEEECCCCCEEECCCEEECCCCCCCCCEEEEEECCEEECCCCEEECCCCCCEEEE IKLDGYTESNDSATALGYANQDIDSLVGRVGFQVHLDGAMVKPYLQATYDHEFKDGGEAS EEECCCCCCCCCEEEEECCCCCHHHHHHHCCEEEEECCCEECHHHHHHCCCCCCCCCCHH AWLQSMPEVGMYTVPGQNFDRNYATVVLGARTGLWGLQSNIGLSTTTAQRSARDATLFVN HHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECHHHCCCCCEEEEEE FSGNF ECCCC >Mature Secondary Structure APAGLFGVDWTAGDLVFGGFAGFGRMDADFGNRNSSFKQDDTTLGGFFGWYTGPVWVNA CCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCHHEECCCEEEEE QVSYSWLSYDVDREVQLGPATRVHSGSPDGSNLTAALNAGYSLGEGNLKYGPVAGLTWQK EEEEEEEEECCCCCEEECCCEEECCCCCCCCCEEEEEECCEEECCCCEEECCCCCCEEEE IKLDGYTESNDSATALGYANQDIDSLVGRVGFQVHLDGAMVKPYLQATYDHEFKDGGEAS EEECCCCCCCCCEEEEECCCCCHHHHHHHCCEEEEECCCEECHHHHHHCCCCCCCCCCHH AWLQSMPEVGMYTVPGQNFDRNYATVVLGARTGLWGLQSNIGLSTTTAQRSARDATLFVN HHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECHHHCCCCCEEEEEE FSGNF ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA