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The map label for this gene is cobC [H]

Identifier: 78048874

GI number: 78048874

Start: 3795778

End: 3796761

Strand: Reverse

Name: cobC [H]

Synonym: XCV3318

Alternate gene names: 78048874

Gene position: 3796761-3795778 (Counterclockwise)

Preceding gene: 78048875

Following gene: 78048873

Centisome position: 73.32

GC content: 68.6

Gene sequence:

>984_bases
ATGCTTGAACATGGCGGGCGCCTGCGCCGCGCTGCGCAGGCTTACAACATTCCGCTCGCGCACTGGCTGGACCTGTCCAC
CGGCGTGAGCCCGTTCGCCTGGCCGGTGCCCGCCATTCCGGAACATGCGTGGCAGCGCTTGCCGGAAGACGACGATGGCC
TGGCAGAGTGCGCGGCTGCCTATTACGGCGCGCCGCAGGTACTGCCGGTGCCCGGCTCGCAGGCGGCGATTCAGGCCTTG
CCACTGCTGCGCGCGCCCGGCCGCGTCGGCGTACTTACGCCTGGTTACGCCGAGCATGCACAGGCATGGCGGCGTGCCGG
GCATCAGGTCGTGCCGATGAGCGCGGCGCAATTGCTGCACGCGGGTGAGACGCTGGATGTGGCCGTGCTGATTCATCCCA
ATAATCCATGCGCCGAGTGCTTCGATCCCGACGCGCTGCTGCAGCTGCATGCGCGGCTTGCAGCACGCGGCGGGTGGCTG
ATGATCGACGAGGCCTTCATGGATGCGACCCCGCAACACAGCGTCTGCGCCTTCACCCAGCGGCCCGGTTTGGTGGTGCT
GCGCTCGGTGGGCAAGTTCTTCGGCATGGCAGGCGCACGTGCGGGCTTTGTCTGCGCAGATCGCGCATTGCTGGATGCCG
TGCGCGAACGCTTGGGACCATGGACGCTGAGCGGGCCGGCGCGATGGGCCGTGCAGCAGGCATTGGCCGATACGCCGTGG
CAGGTTCAGGCATGTGCGCGTCTGCACGCGGCCTCGCAGCGGCTTGCGCAGCTGTTGCATGCGCATGCGATCGTACCTAC
CGCAGGCACGGCGTTCTTTCAGTGGTGCCGGCGCGACGACGCGGCTGCCTTGCACGTCGCGCTGGCGCAGCGCGGCATTT
TGACGCGGCTGTTCGACACACCGAACAGTCTGCGCCTGGGTCTTCCACCCGACGCCGCGGGCGAGGCGCGCCTGGGCGTG
GCACTGCGCCAGGTGCTGGCATGA

Upstream 100 bases:

>100_bases
GCGATGATCGGCACGCGGATGGCCTGGCGTTTCACCAACACGCACCGGCGCACCGTTCACGCCGGCGCAGGTAGCGCCGC
TCCATTACCGGGAGTGCGCA

Downstream 100 bases:

>100_bases
GCGCGCGCGTCCTGATGGTGCAGGGCTGCACCTCCGATGCGGGCAAGAGCACGCTGGTGGCCGCGCTGTGCCGGTGGCTG
CATCGGCAGGGCATTGCGGT

Product: threonine-phosphate decarboxylase

Products: NA

Alternate protein names: L-threonine-O-3-phosphate decarboxylase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLEHGGRLRRAAQAYNIPLAHWLDLSTGVSPFAWPVPAIPEHAWQRLPEDDDGLAECAAAYYGAPQVLPVPGSQAAIQAL
PLLRAPGRVGVLTPGYAEHAQAWRRAGHQVVPMSAAQLLHAGETLDVAVLIHPNNPCAECFDPDALLQLHARLAARGGWL
MIDEAFMDATPQHSVCAFTQRPGLVVLRSVGKFFGMAGARAGFVCADRALLDAVRERLGPWTLSGPARWAVQQALADTPW
QVQACARLHAASQRLAQLLHAHAIVPTAGTAFFQWCRRDDAAALHVALAQRGILTRLFDTPNSLRLGLPPDAAGEARLGV
ALRQVLA

Sequences:

>Translated_327_residues
MLEHGGRLRRAAQAYNIPLAHWLDLSTGVSPFAWPVPAIPEHAWQRLPEDDDGLAECAAAYYGAPQVLPVPGSQAAIQAL
PLLRAPGRVGVLTPGYAEHAQAWRRAGHQVVPMSAAQLLHAGETLDVAVLIHPNNPCAECFDPDALLQLHARLAARGGWL
MIDEAFMDATPQHSVCAFTQRPGLVVLRSVGKFFGMAGARAGFVCADRALLDAVRERLGPWTLSGPARWAVQQALADTPW
QVQACARLHAASQRLAQLLHAHAIVPTAGTAFFQWCRRDDAAALHVALAQRGILTRLFDTPNSLRLGLPPDAAGEARLGV
ALRQVLA
>Mature_327_residues
MLEHGGRLRRAAQAYNIPLAHWLDLSTGVSPFAWPVPAIPEHAWQRLPEDDDGLAECAAAYYGAPQVLPVPGSQAAIQAL
PLLRAPGRVGVLTPGYAEHAQAWRRAGHQVVPMSAAQLLHAGETLDVAVLIHPNNPCAECFDPDALLQLHARLAARGGWL
MIDEAFMDATPQHSVCAFTQRPGLVVLRSVGKFFGMAGARAGFVCADRALLDAVRERLGPWTLSGPARWAVQQALADTPW
QVQACARLHAASQRLAQLLHAHAIVPTAGTAFFQWCRRDDAAALHVALAQRGILTRLFDTPNSLRLGLPPDAAGEARLGV
ALRQVLA

Specific function: Decarboxylates L-threonine-O-3-phosphate to yield (R)-1- amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin [H]

COG id: COG0079

COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR005860
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =4.1.1.81 [H]

Molecular weight: Translated: 35132; Mature: 35132

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHGGRLRRAAQAYNIPLAHWLDLSTGVSPFAWPVPAIPEHAWQRLPEDDDGLAECAAA
CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHH
YYGAPQVLPVPGSQAAIQALPLLRAPGRVGVLTPGYAEHAQAWRRAGHQVVPMSAAQLLH
HCCCCCEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEECHHHHHHHH
AGETLDVAVLIHPNNPCAECFDPDALLQLHARLAARGGWLMIDEAFMDATPQHSVCAFTQ
CCCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEECC
RPGLVVLRSVGKFFGMAGARAGFVCADRALLDAVRERLGPWTLSGPARWAVQQALADTPW
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCH
QVQACARLHAASQRLAQLLHAHAIVPTAGTAFFQWCRRDDAAALHVALAQRGILTRLFDT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
PNSLRLGLPPDAAGEARLGVALRQVLA
CCCEEECCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MLEHGGRLRRAAQAYNIPLAHWLDLSTGVSPFAWPVPAIPEHAWQRLPEDDDGLAECAAA
CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHH
YYGAPQVLPVPGSQAAIQALPLLRAPGRVGVLTPGYAEHAQAWRRAGHQVVPMSAAQLLH
HCCCCCEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEECHHHHHHHH
AGETLDVAVLIHPNNPCAECFDPDALLQLHARLAARGGWLMIDEAFMDATPQHSVCAFTQ
CCCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEECC
RPGLVVLRSVGKFFGMAGARAGFVCADRALLDAVRERLGPWTLSGPARWAVQQALADTPW
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCH
QVQACARLHAASQRLAQLLHAHAIVPTAGTAFFQWCRRDDAAALHVALAQRGILTRLFDT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
PNSLRLGLPPDAAGEARLGVALRQVLA
CCCEEECCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]