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The map label for this gene is nudE [H]

Identifier: 78048757

GI number: 78048757

Start: 3638681

End: 3639238

Strand: Reverse

Name: nudE [H]

Synonym: XCV3201

Alternate gene names: 78048757

Gene position: 3639238-3638681 (Counterclockwise)

Preceding gene: 78048760

Following gene: 78048756

Centisome position: 70.28

GC content: 64.16

Gene sequence:

>558_bases
GTGCGACGCATGAGCTCGCGTCTGCCGATCATCCACAAGATCACCGATCTGGGCGACGGACCGTTCCGTCGGCAGCAGCT
GGATCTGGAATTTTCCAACGGGCAGCGCCGCATCTACGAACGCCAACTCAGCCAGGGCCACGGCGCCGTGGTGGTGGTGC
CGATGCTCGATGCGCAAACCGTGCTGCTGGTGCGCGAATATGCCGCCGGCGTGCATCGCTACGAGCTCGGTCTGGTCAAG
GGCCGCATCGACGCCGGCGAAACACCCGAGCAGGCCGCCGACCGCGAGCTCAAGGAAGAAGCCGGCTATGGCGCACGCCA
GGTACAGGTGCTGCGCGCAATGACGCTTGCTCCTACTTATATGAGTCACCAATCCTGGTTGGTGCTGGCACGCGACCTCT
ACCCCGAGCGCCTGGTGGGCGACGAGCCGGAAGAGATGGACGTGGTGCCGTGGCCGATCGCACGTCTGGACGAATTGATG
CTGCGCGAAGATTTCTCCGAAGGCCGCTCGCTGGCCGCCTTGTTCATTGCGCGCGAGTGGCTGGAGCGCAATCCATGA

Upstream 100 bases:

>100_bases
CAATGTTCGGCAGTTTGTGCGGCTGCAGGGTCTGCTAGGATTTCGGGTTCATGGACATGTCGATGCATCCGCCTATTCTA
TCGGCCCGCTTTGCGGTTGC

Downstream 100 bases:

>100_bases
TCCGCATCCCGATGGAGCTGCGCGAAACCGTGATCGCCATCGCGCGCGATGCCGGCGCCGCAATCATGGAGGTCTACGCC
CAGGACTTTTCGGTGGAGAT

Product: ADP-ribose diphosphatase NudE

Products: AMP; D-Ribose 5- Phosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRRMSSRLPIIHKITDLGDGPFRRQQLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLLVREYAAGVHRYELGLVK
GRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELM
LREDFSEGRSLAALFIAREWLERNP

Sequences:

>Translated_185_residues
MRRMSSRLPIIHKITDLGDGPFRRQQLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLLVREYAAGVHRYELGLVK
GRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELM
LREDFSEGRSLAALFIAREWLERNP
>Mature_185_residues
MRRMSSRLPIIHKITDLGDGPFRRQQLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLLVREYAAGVHRYELGLVK
GRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELM
LREDFSEGRSLAALFIAREWLERNP

Specific function: Active on adenosine(5')triphospho(5')adenosine (Ap3A), ADP-ribose, NADH, adenosine(5')diphospho(5')adenosine (Ap2A) [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789800, Length=161, Percent_Identity=49.0683229813665, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 21211; Mature: 21211

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMSSRLPIIHKITDLGDGPFRRQQLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQT
CCCCCCCCCHHHHHHCCCCCCCCCEEECEEECCCHHHHHHHHHHCCCCCEEEEECCCCHH
VLLVREYAAGVHRYELGLVKGRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTY
HHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLREDFSEGRSLAALFIAREW
HCCCHHEEHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LERNP
HHCCC
>Mature Secondary Structure
MRRMSSRLPIIHKITDLGDGPFRRQQLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQT
CCCCCCCCCHHHHHHCCCCCCCCCEEECEEECCCHHHHHHHHHHCCCCCEEEEECCCCHH
VLLVREYAAGVHRYELGLVKGRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTY
HHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLREDFSEGRSLAALFIAREW
HCCCHHEEHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LERNP
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP-Ribose; H2O [C]

Specific reaction: ADP-Ribose + H2O = AMP + D-Ribose 5- Phosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9452430 [H]