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The map label for this gene is ynfA [C]

Identifier: 78048754

GI number: 78048754

Start: 3636357

End: 3636692

Strand: Reverse

Name: ynfA [C]

Synonym: XCV3198

Alternate gene names: 78048754

Gene position: 3636692-3636357 (Counterclockwise)

Preceding gene: 78048755

Following gene: 78048753

Centisome position: 70.23

GC content: 65.77

Gene sequence:

>336_bases
ATGACGATCGCGCCGACCACGCTACTGCTGTTTGCCGCGACGGCGCTCGCCGAGTTGGTCGGTTGCTACCTGCCTTATCT
CTGGCTGCGCAAAGGGGGCAGCATGTGGCTGCTGCTGCCCACTGCGCTGAGCCTTGCCGTCTTCGTCTGGCTGTTGAGCT
TGCATCCGGAAGCGAGCGGTCGCGTGTACGCGGCCTATGGCGGGGTCTACATCGCCAGCGCGTTGCTGTGGTTGTGGTGG
GTGGACGGCGTGACGCCGACGCGCTGGGATCTGCTCGGCGCTGCCTGTTGCCTGCTCGGCATGGCGGTGATCATGTTCTC
GCCGCGTAGCGCCTGA

Upstream 100 bases:

>100_bases
CTGCCGGCAGTGACCCGTCCGTTGGCGGTGAGGCTTCCCGCAGCGCACCGGGGTATCAAACCGGCCCTGATGGCGCCGCC
TCCGATACGCCCCGGCCGGC

Downstream 100 bases:

>100_bases
GCGCGTTTGCATGTGCGCGCACACGCTGATTGCCTTGCGACAGCGGCCGGGTGCAGCGGCTGCGCCCGGGCCTGCCCCGC
ACGTGGCCGGCGTTGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTIAPTTLLLFAATALAELVGCYLPYLWLRKGGSMWLLLPTALSLAVFVWLLSLHPEASGRVYAAYGGVYIASALLWLWW
VDGVTPTRWDLLGAACCLLGMAVIMFSPRSA

Sequences:

>Translated_111_residues
MTIAPTTLLLFAATALAELVGCYLPYLWLRKGGSMWLLLPTALSLAVFVWLLSLHPEASGRVYAAYGGVYIASALLWLWW
VDGVTPTRWDLLGAACCLLGMAVIMFSPRSA
>Mature_110_residues
TIAPTTLLLFAATALAELVGCYLPYLWLRKGGSMWLLLPTALSLAVFVWLLSLHPEASGRVYAAYGGVYIASALLWLWWV
DGVTPTRWDLLGAACCLLGMAVIMFSPRSA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=100, Percent_Identity=62, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 12078; Mature: 11946

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAPTTLLLFAATALAELVGCYLPYLWLRKGGSMWLLLPTALSLAVFVWLLSLHPEASG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCC
RVYAAYGGVYIASALLWLWWVDGVTPTRWDLLGAACCLLGMAVIMFSPRSA
CEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TIAPTTLLLFAATALAELVGCYLPYLWLRKGGSMWLLLPTALSLAVFVWLLSLHPEASG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCC
RVYAAYGGVYIASALLWLWWVDGVTPTRWDLLGAACCLLGMAVIMFSPRSA
CEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA