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The map label for this gene is yqgE [C]

Identifier: 78048619

GI number: 78048619

Start: 3487405

End: 3487971

Strand: Reverse

Name: yqgE [C]

Synonym: XCV3063

Alternate gene names: 78048619

Gene position: 3487971-3487405 (Counterclockwise)

Preceding gene: 78048622

Following gene: 78048618

Centisome position: 67.36

GC content: 65.78

Gene sequence:

>567_bases
ATGTCTGTTTTGCCCACGCCTCTGGCCAACCAACTGCTGATTGCGCTTCCGGCGCTGTCCGACCCCACCTTCTCGCGCAG
CGTCGCGCTGATCTGTCAGCACGACGAGAACGGCGCCATGGGCGTGCTGGTCAACCGGCCTTCCGAATACACCCTGGGCG
AAGTGTTGTCGCAGATGGGCATCGACACCGACGATGAGCCGCTGCGCGAGCAGGTCGTGCTCAGCGGCGGGCCGGTGCAC
CCTGAGCGCGGTTTTGTGATCCATGACGATGCGCGCGAATGGGATTCCAGCCTGGAAGTGGGGCAGGGCGTGTTCCTGAC
CACCTCGCGCGACATCCTTGAGGCGATGGCGGCCGGCAACGGCCCGCGCAATGCGCTGGTCGCGCTGGGCTGCGCGGGTT
GGGGTGCCGGCCAGCTGGAATTCGAGCTGGGCGAAAACAGCTGGCTCACCGCGCCCTCGGATGCCAACGTGCTATTTGCG
ACCGCGCTGGAAGATCGCTGGCAGACCGCTGCCGGGCGTATCGGCGTAGACCTGTTCCGGCTCACGGATTATTCCGGGCA
TGCCTGA

Upstream 100 bases:

>100_bases
GAAGGCTGCCGCATCGGCGGCATCGCACGTTTCCGGCGCCGGCAAGGCCCAGTATGGCAGCGGCTCTGCGCGCGGCGAAG
CGAACGGCTAGAATGCGGCC

Downstream 100 bases:

>100_bases
GGCGGGCGCGATTCGCCCCGATGGCACGGTGCTGGGCTTCGACGTGGGGTCGCGCCGGATCGGCGTGGCGGTCGGAACCG
CGCTCGGTGCCGGCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQVVLSGGPVH
PERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFA
TALEDRWQTAAGRIGVDLFRLTDYSGHA

Sequences:

>Translated_188_residues
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQVVLSGGPVH
PERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFA
TALEDRWQTAAGRIGVDLFRLTDYSGHA
>Mature_187_residues
SVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQVVLSGGPVHP
ERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFAT
ALEDRWQTAAGRIGVDLFRLTDYSGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

Organism=Escherichia coli, GI87082187, Length=185, Percent_Identity=45.4054054054054, Blast_Score=170, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 20087; Mature: 19955

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMG
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHC
IDTDDEPLREQVVLSGGPVHPERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGN
CCCCCCHHHHEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEECHHHHHHHHCCC
GPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFR
CCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEE
LTDYSGHA
EECCCCCC
>Mature Secondary Structure 
SVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMG
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHC
IDTDDEPLREQVVLSGGPVHPERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGN
CCCCCCHHHHEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEECHHHHHHHHCCC
GPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFR
CCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEE
LTDYSGHA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA