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The map label for this gene is ruvX [C]

Identifier: 78048618

GI number: 78048618

Start: 3486945

End: 3487412

Strand: Reverse

Name: ruvX [C]

Synonym: XCV3062

Alternate gene names: 78048618

Gene position: 3487412-3486945 (Counterclockwise)

Preceding gene: 78048619

Following gene: 78048617

Centisome position: 67.34

GC content: 70.51

Gene sequence:

>468_bases
ATGCCTGAGGCGGGCGCGATTCGCCCCGATGGCACGGTGCTGGGCTTCGACGTGGGGTCGCGCCGGATCGGCGTGGCGGT
CGGAACCGCGCTCGGTGCCGGCGCGCGCGCGGTGGCTGTCATCAATGTGCATGCCAACGGCCCGGACTGGGTTGCGTTGG
ACCGCGTGTACAAGCAGTGGCGACCGGACGGCCTGGTGGTCGGCGACCCGCTCACGCTGGACGACAAAGACCAACCCGCC
CGAAAACGCGCACACGCGTTCGGCCGCCAGCTGCGCGAGCGCTATGCGCTGCCGGTTGTCCTGATCGACGAGCGCTCCAG
TTCGGTTGAGGCTGCGCAGCGTTTCGCGCGCGAGCGCGCCGATGGGCGCAAGCGCCGCCGCGACGCCGAAGCGCTCGATG
CGATGGCCGCCGCAGTGATCGTCGAACGCTGGTTGGCCGCGCCCGACCAAGCCACCTCTCTTCCTTGA

Upstream 100 bases:

>100_bases
GATGCCAACGTGCTATTTGCGACCGCGCTGGAAGATCGCTGGCAGACCGCTGCCGGGCGTATCGGCGTAGACCTGTTCCG
GCTCACGGATTATTCCGGGC

Downstream 100 bases:

>100_bases
CTCCCGACCTGCGATGACCACCATGCAACTCGATTCGGACGGACGCCTGCGCCACCTGCTCACCCTGGAAGGACTGCCGC
GCACCACGCTGCTGCAATTG

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPEAGAIRPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHANGPDWVALDRVYKQWRPDGLVVGDPLTLDDKDQPA
RKRAHAFGRQLRERYALPVVLIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQATSLP

Sequences:

>Translated_155_residues
MPEAGAIRPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHANGPDWVALDRVYKQWRPDGLVVGDPLTLDDKDQPA
RKRAHAFGRQLRERYALPVVLIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQATSLP
>Mature_154_residues
PEAGAIRPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHANGPDWVALDRVYKQWRPDGLVVGDPLTLDDKDQPAR
KRAHAFGRQLRERYALPVVLIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQATSLP

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=135, Percent_Identity=36.2962962962963, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16786; Mature: 16655

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAGAIRPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHANGPDWVALDRVYKQW
CCCCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHH
RPDGLVVGDPLTLDDKDQPARKRAHAFGRQLRERYALPVVLIDERSSSVEAAQRFARERA
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
DGRKRRRDAEALDAMAAAVIVERWLAAPDQATSLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PEAGAIRPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHANGPDWVALDRVYKQW
CCCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHH
RPDGLVVGDPLTLDDKDQPARKRAHAFGRQLRERYALPVVLIDERSSSVEAAQRFARERA
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
DGRKRRRDAEALDAMAAAVIVERWLAAPDQATSLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]