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The map label for this gene is ycfJ [C]

Identifier: 78048615

GI number: 78048615

Start: 3484484

End: 3485173

Strand: Reverse

Name: ycfJ [C]

Synonym: XCV3059

Alternate gene names: 78048615

Gene position: 3485173-3484484 (Counterclockwise)

Preceding gene: 78048616

Following gene: 78048612

Centisome position: 67.3

GC content: 64.2

Gene sequence:

>690_bases
ATGGGGCTTTTTACGGCCGGTTTGGTTCAGTGCGGTTTCACTGGCGCAGGACGAGCATCGGCAGCGTGTCCTCCCTATGA
AGCTGCCGCAATGAAAACTCTCGTGCTTGGTGCTCTGGTGATGGGTCTGGTCGTGGCGGGCAATGCCACGGCGCAGCGCT
ATGACAGCGGCTACCGCGATTACGGCCGCAGCGGCTACGAGGATGGCCGTTACGAATATGCGCGCGTCGTGCGCGTGGAT
CCGATCATCGTTGCCGACTCCTACAACGAGCGCACCAGCGAGCGTTGCTACGATCGTCCCGCCGACGGTTATTACACGAG
CAACGACGGGTATTACCGCGACGGCGGCTATGCACAGGCCGGTGTGTCCAATCGCGGCGTGGCCAGTGTGATCGGTGGTA
TTGCGGGTGCCGTGCTCGGCAGCCAGGTCGGCGGCGGCAATGGTCGTCTGGTCGGTACCGCCGTGGGCACCATGGCGGGC
GTCGCGGCGGGCCGTTCGATCTATGAGGCCAATCACCGCACCTACCAGGGCAACGTGAGGGTCTGCGAGCCGGTGTCCTA
CCGCCGTGAACGCGACCGCGTGGATGGCTACGACGTCACCTACGAATACGCCGGCCGCATGTACCACACGCGTAGCGATT
ACAACCCGGGCGACCGAATCCGTGTGCGTGTCGACGTGCGCCCCGACTGA

Upstream 100 bases:

>100_bases
CGGTGCCCATCAGTCTGGAAACCGAGTTTTCCAGCTAACGCCAATACCGCTGCGACGCGTCGGCGCAAACGCCCGGCGCG
CGCAGCTGGCGGCAACCTGA

Downstream 100 bases:

>100_bases
TCAGTGCCGGATGCATGCGGTGCCGCTGGTGGCTCCGGCATCGGGCTAAACAGAACGCTGCGGGCAACCGCAGCGTTCTT
GCGTTTGGCGGAGCGATTGC

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGLFTAGLVQCGFTGAGRASAACPPYEAAAMKTLVLGALVMGLVVAGNATAQRYDSGYRDYGRSGYEDGRYEYARVVRVD
PIIVADSYNERTSERCYDRPADGYYTSNDGYYRDGGYAQAGVSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAG
VAAGRSIYEANHRTYQGNVRVCEPVSYRRERDRVDGYDVTYEYAGRMYHTRSDYNPGDRIRVRVDVRPD

Sequences:

>Translated_229_residues
MGLFTAGLVQCGFTGAGRASAACPPYEAAAMKTLVLGALVMGLVVAGNATAQRYDSGYRDYGRSGYEDGRYEYARVVRVD
PIIVADSYNERTSERCYDRPADGYYTSNDGYYRDGGYAQAGVSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAG
VAAGRSIYEANHRTYQGNVRVCEPVSYRRERDRVDGYDVTYEYAGRMYHTRSDYNPGDRIRVRVDVRPD
>Mature_228_residues
GLFTAGLVQCGFTGAGRASAACPPYEAAAMKTLVLGALVMGLVVAGNATAQRYDSGYRDYGRSGYEDGRYEYARVVRVDP
IIVADSYNERTSERCYDRPADGYYTSNDGYYRDGGYAQAGVSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAGV
AAGRSIYEANHRTYQGNVRVCEPVSYRRERDRVDGYDVTYEYAGRMYHTRSDYNPGDRIRVRVDVRPD

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24679; Mature: 24547

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFTAGLVQCGFTGAGRASAACPPYEAAAMKTLVLGALVMGLVVAGNATAQRYDSGYRD
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHH
YGRSGYEDGRYEYARVVRVDPIIVADSYNERTSERCYDRPADGYYTSNDGYYRDGGYAQA
HCCCCCCCCCEEEEEEEEECEEEEECCCCCHHHHHHCCCCCCCCEECCCCEEECCCEEEC
GVSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAGVAAGRSIYEANHRTYQGNVR
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCHHHHCCCEEEECCEE
VCEPVSYRRERDRVDGYDVTYEYAGRMYHTRSDYNPGDRIRVRVDVRPD
EECCHHHHHHHCCCCCCEEEHHHCCCEEECCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
GLFTAGLVQCGFTGAGRASAACPPYEAAAMKTLVLGALVMGLVVAGNATAQRYDSGYRD
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHH
YGRSGYEDGRYEYARVVRVDPIIVADSYNERTSERCYDRPADGYYTSNDGYYRDGGYAQA
HCCCCCCCCCEEEEEEEEECEEEEECCCCCHHHHHHCCCCCCCCEECCCCEEECCCEEEC
GVSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAGVAAGRSIYEANHRTYQGNVR
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCHHHHCCCEEEECCEE
VCEPVSYRRERDRVDGYDVTYEYAGRMYHTRSDYNPGDRIRVRVDVRPD
EECCHHHHHHHCCCCCCEEEHHHCCCEEECCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA