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The map label for this gene is ysgA [C]

Identifier: 78048607

GI number: 78048607

Start: 3475333

End: 3476193

Strand: Reverse

Name: ysgA [C]

Synonym: XCV3051

Alternate gene names: 78048607

Gene position: 3476193-3475333 (Counterclockwise)

Preceding gene: 78048608

Following gene: 78048605

Centisome position: 67.13

GC content: 66.55

Gene sequence:

>861_bases
ATGACCTCTCCTGCACGGCAGCAGCGCCTACACTCGCCGCACCATCCTGGGAGCAAGCACATTTACAAGCAACGGACATG
GCGTGGCATTGGGTTGATCGGTGTTCTGGCTTCGCTGGCCTTCCCCGCAGCAGCGGCGATGCAGGCCAAGCCGCTGGAAT
GGAAGATCGGCAAGGACACCTATAGCGGCGTGCTGGTGTACGACGATGCCGGCGATGCCAAGCGCCCGGGGCTGGTCATG
GTGCCCAACTGGCGCGGTGTCAACGACTCGGCGGTGACCAAGGCCAAGCAGCTGGCCGGCGACGATTACGTGGTGCTGGT
GGCCGACGTGTATGGCAAGGGCAAGCGCCCGGCCAACGACAGCGAGGCTGGGCAGTTCGCCGGCGCCCTGAAGAAGGATC
CGCCGGAGTTGCGCGCACGCGCACTGAAAGCGGTAGAGGTGCTCAAGGCGCAGGCCGGCAAGGCGCCGCTGGACGCAGCG
CGCATCGGTGCGGTGGGTTTCTGCTTCGGCGGCACCACGGTGCTGGAGCTGGTGCGCTCAGGCGCGCAGCTGGCCGGCGT
GGTGAGCCTGCATGGTGGCATCGCGACTCCCAGCCCGGCCGCCGCCGGCTCGGCCAAGACGCCGCTGCTGGTGCTCAACG
GTGCCGACGACAAGAGCGTGAGCAAGGCGGATATCGCCGCGTTCGAAACCGAAATGAATGCGGCCGGCGCAGATTGGCAA
TTCGTCAATTTCAGCGGCGCGGTGCATTGCTTTGCCGAGGCCGACGCCAACAGCCCGCCGGGCTGCCTGTACAACCCGCG
TGCGGCCAAGCGGGCGTATCGCATGCTCGGCGATTTCTTCGACGAGCGCTTTGGGCAGTAG

Upstream 100 bases:

>100_bases
GTGGCGCGATCGCCTCGAAAGCACGCATGCGCAGCGCATGCGAACGCGCAGGTGCGATCGGACTGACTGCCTGCCGCCAC
CGTGGCCGGCAGCGGCGACG

Downstream 100 bases:

>100_bases
CCGGGATTGGTGATTTGGGATTGGGGATTCGCAAGAGCGAAGTCCCGTCCTTCAGCGAATCAAACCCCCGGGTTTTTGCT
CGGGAGTTTCGCTGATCAAT

Product: putative carboxymethylenebutenolidase

Products: oxohex-2-enedioate [C]

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Twin-Arginine Translocation Pathway Signal; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTSPARQQRLHSPHHPGSKHIYKQRTWRGIGLIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVM
VPNWRGVNDSAVTKAKQLAGDDYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAA
RIGAVGFCFGGTTVLELVRSGAQLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQ
FVNFSGAVHCFAEADANSPPGCLYNPRAAKRAYRMLGDFFDERFGQ

Sequences:

>Translated_286_residues
MTSPARQQRLHSPHHPGSKHIYKQRTWRGIGLIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVM
VPNWRGVNDSAVTKAKQLAGDDYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAA
RIGAVGFCFGGTTVLELVRSGAQLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQ
FVNFSGAVHCFAEADANSPPGCLYNPRAAKRAYRMLGDFFDERFGQ
>Mature_285_residues
TSPARQQRLHSPHHPGSKHIYKQRTWRGIGLIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVMV
PNWRGVNDSAVTKAKQLAGDDYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAAR
IGAVGFCFGGTTVLELVRSGAQLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQF
VNFSGAVHCFAEADANSPPGCLYNPRAAKRAYRMLGDFFDERFGQ

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=231, Percent_Identity=36.7965367965368, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17532653, Length=235, Percent_Identity=32.3404255319149, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193204305, Length=215, Percent_Identity=31.6279069767442, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17536419, Length=214, Percent_Identity=28.9719626168224, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17536415, Length=260, Percent_Identity=25, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17534829, Length=154, Percent_Identity=31.1688311688312, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.45 [C]

Molecular weight: Translated: 30084; Mature: 29953

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPARQQRLHSPHHPGSKHIYKQRTWRGIGLIGVLASLAFPAAAAMQAKPLEWKIGKDT
CCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
YSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVTKAKQLAGDDYVVLVADVYGKGKRPAND
CCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC
SEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRS
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEECCHHHHHHHHHC
GAQLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQ
CHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEE
FVNFSGAVHCFAEADANSPPGCLYNPRAAKRAYRMLGDFFDERFGQ
EEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSPARQQRLHSPHHPGSKHIYKQRTWRGIGLIGVLASLAFPAAAAMQAKPLEWKIGKDT
CCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
YSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVTKAKQLAGDDYVVLVADVYGKGKRPAND
CCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC
SEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRS
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEECCHHHHHHHHHC
GAQLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQ
CHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEE
FVNFSGAVHCFAEADANSPPGCLYNPRAAKRAYRMLGDFFDERFGQ
EEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]

Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA