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The map label for this gene is 78048596

Identifier: 78048596

GI number: 78048596

Start: 3461704

End: 3462954

Strand: Reverse

Name: 78048596

Synonym: XCV3040

Alternate gene names: NA

Gene position: 3462954-3461704 (Counterclockwise)

Preceding gene: 78048597

Following gene: 78048593

Centisome position: 66.87

GC content: 65.23

Gene sequence:

>1251_bases
GTGAATGCTGCCGGTGCTGCGCTGATTCGAAACGATATCGTCGTGTTCGGCCTGATCGCCGCCACCCTGGGCGCGGTGTT
CTGGACGTCTGCGCGGGAGCAGGGGTTCTGGCGGCGTTTCTACGCGGTGGTGCCGGCCTTGTTGCTGTGTTATCTGCTGC
CCGGCATCTACAACACGGTCGGTTTGATCGATGGTGCCAACACCAGGTTGTACAACCCGATCGCCCGTGACGTACTGCTG
CCTGCGGCATTGATCCTGCTGACCTTGAGCATCGATCTGCGCGCGATCCTGCGGCTCGGCCCCAAGCTGGTGGCGATGTA
TCTGGGCGCATCGCTAAGCATCATGCTGGGTGCGGTGGTGGCGTTCTGGGTGATGCGCTGGCTGCATCCGGCCACCGTGG
CCGGCGATACCTGGGCCGGCATGGCAGCGCTGGCGGGCAGCTGGATCGGCGGTGGCGCCAACATGCTGGCGATGCGCGAA
GTGTTCGATGTGGACGCAACCACGTTCGGGCAGTTCGCGGTGGTCGATGTCGGCGTGGGCTATGTGTGGATGGCGGCGCT
GATCTTCCTGGCCGGCCGCGCGCGCAAGATCGATGCACGCAGCGGCGCCGACACCCGGGCGCTGGATGCCTTGCAGGAGC
GCATGGCGCGCTTCCAGGCCGAGCATGCGCGCATTCCCAGCTTGGCCGACTTGATGGTGATCGTGGCGGTGGCATTCGGC
GGTGTCGGCCTTGCGCATGCCCTGGCCAATCCCCTTGCCGCGTGGTGCAAGGCGCAGTTGGATTGGGCCAGCCAGTTCAG
CCTGGACACGCCGTTCGTGTGGGTGGTGGTGCTGGCGACCAGCCTGGGCCTGCTGCTGAGCTTTACCCGTGCGCGCACGC
TGGAGGGCGCGGGCGCGTCCAGGATCGGCACCTTGCTGCTGTATTTCCTGATCGCCTGCATCGGCATGCAGATGGATCTG
CTGGCGCTGCTGGACCGGCCATGGTTGTTTCTGCTCGGCCTGATCTGGATTGCCGTGCACATTGCCGTGTTATGGGGGCT
TGGCCGGTTGTTGCGGGTGCCGTTCTTTTATTTTGCGATCGGCTCGCAATCCAATATCGGCGGCCCGGCCTCCGCGCCGG
TGGTTGCCGCGGCATTTCACCCGGCTCTGGCGCCGGTCGGTGTGCTGCTGGGCACGATGGGCTACGCCACCGGCACCTAT
CTGGCCTATCTGGTCGGCATTACTTTGCGGGCGATGGCAGGCGCTGGATAA

Upstream 100 bases:

>100_bases
GCGGGATTTGCGCAGACGTCCGGGTCGGCTAGATTCGAGGTATTGGCCACCTGGGGCCAGTCCGCGCTCTGGCGGCTACT
TCTCTGGATGTCCGCCTGTC

Downstream 100 bases:

>100_bases
CTCGCGCCGCAATCTGCAACGCCACGATGAAGCGACCGAGCGAGTATCACACCGCTGTGCAATCGCCAGTGCGGCTGGGC
GATGCTCGGTGTTGCGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MNAAGAALIRNDIVVFGLIAATLGAVFWTSAREQGFWRRFYAVVPALLLCYLLPGIYNTVGLIDGANTRLYNPIARDVLL
PAALILLTLSIDLRAILRLGPKLVAMYLGASLSIMLGAVVAFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMRE
VFDVDATTFGQFAVVDVGVGYVWMAALIFLAGRARKIDARSGADTRALDALQERMARFQAEHARIPSLADLMVIVAVAFG
GVGLAHALANPLAAWCKAQLDWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGASRIGTLLLYFLIACIGMQMDL
LALLDRPWLFLLGLIWIAVHIAVLWGLGRLLRVPFFYFAIGSQSNIGGPASAPVVAAAFHPALAPVGVLLGTMGYATGTY
LAYLVGITLRAMAGAG

Sequences:

>Translated_416_residues
MNAAGAALIRNDIVVFGLIAATLGAVFWTSAREQGFWRRFYAVVPALLLCYLLPGIYNTVGLIDGANTRLYNPIARDVLL
PAALILLTLSIDLRAILRLGPKLVAMYLGASLSIMLGAVVAFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMRE
VFDVDATTFGQFAVVDVGVGYVWMAALIFLAGRARKIDARSGADTRALDALQERMARFQAEHARIPSLADLMVIVAVAFG
GVGLAHALANPLAAWCKAQLDWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGASRIGTLLLYFLIACIGMQMDL
LALLDRPWLFLLGLIWIAVHIAVLWGLGRLLRVPFFYFAIGSQSNIGGPASAPVVAAAFHPALAPVGVLLGTMGYATGTY
LAYLVGITLRAMAGAG
>Mature_416_residues
MNAAGAALIRNDIVVFGLIAATLGAVFWTSAREQGFWRRFYAVVPALLLCYLLPGIYNTVGLIDGANTRLYNPIARDVLL
PAALILLTLSIDLRAILRLGPKLVAMYLGASLSIMLGAVVAFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMRE
VFDVDATTFGQFAVVDVGVGYVWMAALIFLAGRARKIDARSGADTRALDALQERMARFQAEHARIPSLADLMVIVAVAFG
GVGLAHALANPLAAWCKAQLDWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGASRIGTLLLYFLIACIGMQMDL
LALLDRPWLFLLGLIWIAVHIAVLWGLGRLLRVPFFYFAIGSQSNIGGPASAPVVAAAFHPALAPVGVLLGTMGYATGTY
LAYLVGITLRAMAGAG

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44235; Mature: 44235

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAGAALIRNDIVVFGLIAATLGAVFWTSAREQGFWRRFYAVVPALLLCYLLPGIYNTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIDGANTRLYNPIARDVLLPAALILLTLSIDLRAILRLGPKLVAMYLGASLSIMLGAVV
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMREVFDVDATTFGQFAVVDVGVG
HHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHH
YVWMAALIFLAGRARKIDARSGADTRALDALQERMARFQAEHARIPSLADLMVIVAVAFG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GVGLAHALANPLAAWCKAQLDWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RIGTLLLYFLIACIGMQMDLLALLDRPWLFLLGLIWIAVHIAVLWGLGRLLRVPFFYFAI
HHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
GSQSNIGGPASAPVVAAAFHPALAPVGVLLGTMGYATGTYLAYLVGITLRAMAGAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAAGAALIRNDIVVFGLIAATLGAVFWTSAREQGFWRRFYAVVPALLLCYLLPGIYNTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIDGANTRLYNPIARDVLLPAALILLTLSIDLRAILRLGPKLVAMYLGASLSIMLGAVV
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMREVFDVDATTFGQFAVVDVGVG
HHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHH
YVWMAALIFLAGRARKIDARSGADTRALDALQERMARFQAEHARIPSLADLMVIVAVAFG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GVGLAHALANPLAAWCKAQLDWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RIGTLLLYFLIACIGMQMDLLALLDRPWLFLLGLIWIAVHIAVLWGLGRLLRVPFFYFAI
HHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
GSQSNIGGPASAPVVAAAFHPALAPVGVLLGTMGYATGTYLAYLVGITLRAMAGAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA