| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is creC [H]
Identifier: 78048570
GI number: 78048570
Start: 3427361
End: 3428809
Strand: Reverse
Name: creC [H]
Synonym: XCV3014
Alternate gene names: 78048570
Gene position: 3428809-3427361 (Counterclockwise)
Preceding gene: 162138532
Following gene: 78048568
Centisome position: 66.21
GC content: 66.53
Gene sequence:
>1449_bases ATGCGGCTTGGTCTCAAGCTGTTCCTGGGCTTCTTCCTGATCGTGGGCCTGGCCGCGTTCTTCGTGATGCGCGTGTTCGT CAACGAGGTCAAGCCAGGGGTGCGCCAGGCGATGGAATCCACGCTGGTGGATGCGGCCAATGTGCTGGCGGAAATGGCCA GTGGCGAGTTGGCTGCCGGCACGCTTGCCGATGGCCGCTTCGCGCGCAACGTGGCCAGGGCCCAGCAGCGCGACCCCAAG GCGTGGGTATGGCGCTTTCGCAAGAACACGGTGGATTACCGCGTGACCGTCACCGATGCGCGCGGCGTGGTGGTGTTCGA TTCGCTGGGCCGCGACGTGGGCCGCGACAACTCGCGCTGGAACGATGTCTATCGCACGCTGCGCGGCGAATATGGCGCGC GTTCCAGCCCGGACATCGATGGCGACCCTGCCGCCACGGTGATGCATGTGGCCGCGCCGATCTACGCACCGGACGACCCC GGCAAACTGATCGGCGTGCTGACCCTGGCGCAGCCCAATCGCAGCATCGACCCGTTTATCGAAGCCAGCCAGCGCAACAT CCTGCAGCGCGGCGCCTGGTTGATCGGCATTTCCGTGTTGATCGGCATCTTGATGACCTGGTGGTTGATGCGTGGCATCG GCCGGCTCAATCGCTATGCGCAGGCGGTGAGCGCCGGCATCCCGGTACCGCCGCCCAAACCGCGTGGCGATGAAATCGGC GATCTGGGCCAGGCGCTGGAAAGCATGCGTCGCAAGCTGGAAGGCAAGGCCTACGTGGAGCAGTACGTGCAGTCGCTGAC GCACGAGATGAAAAGCCCGCTGGCGGCCATTCGCGGTGCCTCGGAGTTGTTGACCGAGCCACTGCCGGAGGCCGACCGCC AGCACTTCGTTGCCACCATCCGCGCGCAGGAACACCGGCTCACCGAAACCATCGACAAGCTGCTGGCACTGGCCGAGGTG GAGCAGCACGGCTGGCTGCAGAAGCGCGAGCCCATCGGTATTGATGGGCTGCTGCAGGCTGCGGCGGACGCGGTGGCGCT GCGTGCAGCGGCGGCGGGCATCACCGTGGAGGTGGACGCAGGGGCTGGCGCGCCAGGCGATCACCACGTACTGGGCGATG GGTTTCTGCTCAGGCAGGCACTGATCAATCTGCTCGAAAACGCCATCGCGTTTTCGACGCAAGACAGCCATGTGCGCCTG CAGGCGCGGCTGCGCGACGGACACTGGGAGTTGCTGGTTGAAGACCGCGGCAGTGGCGTGCCGGATTACGCGCTCGAGCG CGTCTTCGAGCGGTTCTATTCGCTGGCACGCCCGCAGACCGGCCAGCGCAGCTCCGGTCTCGGCTTGCCGTTCGTGCGCG AGGTTGCGCGCCTGCATGGCGGGGACGTGATGCTGGGCAACCGCGATGGTGGCGGTGCGCGTGCGGTGTTGCGCCTGCCG ATCGGCTGA
Upstream 100 bases:
>100_bases GGCCGACCCGATCCGCACCCACCGGGGCCTTGGCTACGCGCTGGAGGTATAGGCATGCGCCGGCACGCATTTGGTGAACT GAGCGAGGCCGCGGGCTGAC
Downstream 100 bases:
>100_bases GTCGCTGCAGGCCGTTGTCGCGGCTGGTTGGCGCCGGTGGCAGCCGCGCGTTCAAGGCTGCGGCATGCGCCAGGGCACAT GCCGCGCCTGCATCACTCAG
Product: sensory histidine kinase CreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEMASGELAAGTLADGRFARNVARAQQRDPK AWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRWNDVYRTLRGEYGARSSPDIDGDPAATVMHVAAPIYAPDDP GKLIGVLTLAQPNRSIDPFIEASQRNILQRGAWLIGISVLIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPKPRGDEIG DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLTEPLPEADRQHFVATIRAQEHRLTETIDKLLALAEV EQHGWLQKREPIGIDGLLQAAADAVALRAAAAGITVEVDAGAGAPGDHHVLGDGFLLRQALINLLENAIAFSTQDSHVRL QARLRDGHWELLVEDRGSGVPDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVMLGNRDGGGARAVLRLP IG
Sequences:
>Translated_482_residues MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEMASGELAAGTLADGRFARNVARAQQRDPK AWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRWNDVYRTLRGEYGARSSPDIDGDPAATVMHVAAPIYAPDDP GKLIGVLTLAQPNRSIDPFIEASQRNILQRGAWLIGISVLIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPKPRGDEIG DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLTEPLPEADRQHFVATIRAQEHRLTETIDKLLALAEV EQHGWLQKREPIGIDGLLQAAADAVALRAAAAGITVEVDAGAGAPGDHHVLGDGFLLRQALINLLENAIAFSTQDSHVRL QARLRDGHWELLVEDRGSGVPDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVMLGNRDGGGARAVLRLP IG >Mature_482_residues MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEMASGELAAGTLADGRFARNVARAQQRDPK AWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRWNDVYRTLRGEYGARSSPDIDGDPAATVMHVAAPIYAPDDP GKLIGVLTLAQPNRSIDPFIEASQRNILQRGAWLIGISVLIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPKPRGDEIG DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLTEPLPEADRQHFVATIRAQEHRLTETIDKLLALAEV EQHGWLQKREPIGIDGLLQAAADAVALRAAAAGITVEVDAGAGAPGDHHVLGDGFLLRQALINLLENAIAFSTQDSHVRL QARLRDGHWELLVEDRGSGVPDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVMLGNRDGGGARAVLRLP IG
Specific function: Member of the two-component regulatory system CreC/CreB involved in catabolic regulation. CreC may function as a membrane- associated protein kinase that phosphorylates CreB in response to environmental signals. CreC can also phosphorylate PhoB [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790861, Length=479, Percent_Identity=46.972860125261, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=27.8761061946903, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1788393, Length=254, Percent_Identity=28.3464566929134, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=26.457399103139, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789403, Length=295, Percent_Identity=30.5084745762712, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788713, Length=253, Percent_Identity=26.8774703557312, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=26.5822784810127, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=24.2914979757085, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082128, Length=314, Percent_Identity=25.1592356687898, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1788279, Length=263, Percent_Identity=27.7566539923954, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790436, Length=417, Percent_Identity=22.3021582733813, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI87081816, Length=285, Percent_Identity=25.9649122807018, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1790551, Length=305, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786783, Length=255, Percent_Identity=22.7450980392157, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789149, Length=255, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI145693157, Length=227, Percent_Identity=25.1101321585903, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52698; Mature: 52698
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEMASGELAAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TLADGRFARNVARAQQRDPKAWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRW CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCEEEEHHHCCCCCCCCCHH NDVYRTLRGEYGARSSPDIDGDPAATVMHVAAPIYAPDDPGKLIGVLTLAQPNRSIDPFI HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHH EASQRNILQRGAWLIGISVLIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPKPRGDEIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLTEPLPEADRQHFVATI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH RAQEHRLTETIDKLLALAEVEQHGWLQKREPIGIDGLLQAAADAVALRAAAAGITVEVDA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC GAGAPGDHHVLGDGFLLRQALINLLENAIAFSTQDSHVRLQARLRDGHWELLVEDRGSGV CCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCC PDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVMLGNRDGGGARAVLRLP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECC IG CC >Mature Secondary Structure MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEMASGELAAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TLADGRFARNVARAQQRDPKAWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRW CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCEEEEHHHCCCCCCCCCHH NDVYRTLRGEYGARSSPDIDGDPAATVMHVAAPIYAPDDPGKLIGVLTLAQPNRSIDPFI HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHH EASQRNILQRGAWLIGISVLIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPKPRGDEIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLTEPLPEADRQHFVATI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH RAQEHRLTETIDKLLALAEVEQHGWLQKREPIGIDGLLQAAADAVALRAAAAGITVEVDA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC GAGAPGDHHVLGDGFLLRQALINLLENAIAFSTQDSHVRLQARLRDGHWELLVEDRGSGV CCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCC PDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVMLGNRDGGGARAVLRLP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECC IG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3531171; 7610040; 9278503; 2835585; 2228961 [H]