| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is apt [H]
Identifier: 78048144
GI number: 78048144
Start: 2917002
End: 2917562
Strand: Reverse
Name: apt [H]
Synonym: XCV2588
Alternate gene names: 78048144
Gene position: 2917562-2917002 (Counterclockwise)
Preceding gene: 78048145
Following gene: 78048142
Centisome position: 56.34
GC content: 65.42
Gene sequence:
>561_bases ATGACTGACTGCAGCCGCTGCGCCGGCACCACGACTTCCGGACCCAACCATTGGTCGGAGCGGATTCGCGACATCGCCGA TTTCCCCAAGCAGGGCATCGTCTTCAAGGACATTACCCCGTTGCTGTCGGACGGCCCGGATTTCGCCTCTGCGCTGGACG AAATGGCGCAGCCGTGGCGCACCACGCCGCTGGATGCGGTGCTGGGTATCGAGGCGCGCGGTTTCATTCTGGGCGCTGCC CTGGCGCGCGAACTGCGGACCGGCTTCGTGCCGGTGCGCAAGCCGGGCAAGCTGCCGGGGCGCACGCTGATCCAGGAATA CGCGCTGGAGTACGGCACCGATCGCATCGAAATGCATGAGGATGCGCTGCCACGCGGGGCGCGCGTACTGATTGTCGACG ACGTGCTGGCCACCGGCGGCACGCTGCGTGCGGCCCTGGGACTTGCTGCCCAACTCGAACTGGAAGTCGTTGGCGCAGCC GTGCTGGTGGAATTGCAGGTGCTGCAGGGTCGCCAGAAATGGGCGAACGATGTGCCGCTGTTGGCGACACTTTCTTACTG A
Upstream 100 bases:
>100_bases TCCTGACGCGCTCAGATGCAGGTATGCCGTAAATCCGGCGTGGATGGCGTGCGCAGCCTAGAATAGGCGCAACCCCACCG GCCACCACGCCACCGCCCTC
Downstream 100 bases:
>100_bases GTCCAAGCGCTGAAGCGACCCTGGATGCGTGGACGTGCGCGCATCCAGGATTGCTCCTGCTGAAACATGGGCGGCCGGCA CGACGCCGGCCGCGCTGCGT
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTDCSRCAGTTTSGPNHWSERIRDIADFPKQGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAA LARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAA VLVELQVLQGRQKWANDVPLLATLSY
Sequences:
>Translated_186_residues MTDCSRCAGTTTSGPNHWSERIRDIADFPKQGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAA LARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAA VLVELQVLQGRQKWANDVPLLATLSY >Mature_185_residues TDCSRCAGTTTSGPNHWSERIRDIADFPKQGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAAL ARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAV LVELQVLQGRQKWANDVPLLATLSY
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=170, Percent_Identity=46.4705882352941, Blast_Score=144, Evalue=3e-35, Organism=Homo sapiens, GI71773201, Length=123, Percent_Identity=47.1544715447154, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1786675, Length=158, Percent_Identity=46.2025316455696, Blast_Score=145, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17509087, Length=171, Percent_Identity=46.1988304093567, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6323619, Length=163, Percent_Identity=38.6503067484663, Blast_Score=111, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6320649, Length=167, Percent_Identity=32.9341317365269, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI17136334, Length=165, Percent_Identity=36.969696969697, Blast_Score=108, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 20120; Mature: 19989
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDCSRCAGTTTSGPNHWSERIRDIADFPKQGIVFKDITPLLSDGPDFASALDEMAQPWR CCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHCCHHHCCCCHHHHHHHHHHCCCC TTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHE CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECH DALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQVLQGRQKWANDVPL HCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCE LATLSY EEEECC >Mature Secondary Structure TDCSRCAGTTTSGPNHWSERIRDIADFPKQGIVFKDITPLLSDGPDFASALDEMAQPWR CCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHCCHHHCCCCHHHHHHHHHHCCCC TTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHE CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECH DALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQVLQGRQKWANDVPL HCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCE LATLSY EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]