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The map label for this gene is yafV [H]

Identifier: 78048076

GI number: 78048076

Start: 2844231

End: 2845031

Strand: Reverse

Name: yafV [H]

Synonym: XCV2520

Alternate gene names: 78048076

Gene position: 2845031-2844231 (Counterclockwise)

Preceding gene: 78048077

Following gene: 78048074

Centisome position: 54.94

GC content: 64.29

Gene sequence:

>801_bases
ATGCACGACCTGCGCATCTCCCTGATCCAAGGCGACACCCGCTGGCATGACCCGGCCGGTAACCGCGACTATTACGCTGC
GCTGCTGGAGCCGCTGGCCGGGCAGACCGATCTGGTGATCCTGCCGGAAACCTTCACCAGCGGGTTCTCCAACGACGCCA
TCGACAAGGCCGAAGGGATGGACGGGCCGACCGTGGCGTGGGTGCGTGCTCAAGCCGCACGCCTGGGTGCAGCGGTGACC
GGCAGCGTGCAGTTGCGCACTGATGCCGGTGTGTTCAACCGGCTGCTCTGGGCCACGCCCGATGGGGCGTTGCAGTACTA
CGACAAGCGCCACCTGTTTCGCTTCGGCAACGAGCATCTGCGTTATGCGGCCGGGCGCGAGCGGCTGACGGTGGAATGGA
AGGGTTGGCGGATCAATCCGCAGGTCTGCTACGACCTGCGGTTTCCGGTGTTCTGCCGCAACCGCTTCGATGTCGAACGC
CCGGGGCAGATGGATTTTGATCTGCAAGTGTTCGTCGCCAACTGGCCGTCCGCCCGCGCCTACGCGTGGAAGACGTTGCT
GCGCGCACGCGCGATCGAAAACCTGTGCTTCGTGGCGGCGGTCAACCGGATTGGCATCGATGGCAACCAACTGCATTACG
CCGGCGACAGCGCGGTGATCGATTTCCTCGGTCAGCCGCAGGTGGAAATCCGCGAACGCGAGCAGGTGGTCACCACCACC
ATCAGCGCAACTGCGCTGGCCGAGCACCGCGCCCGTTTTCCCGCGATGTTGGATGCAGATCGGTTCGAGATTGGGGATTA
G

Upstream 100 bases:

>100_bases
CCGCTTTTTGATCTGAATTCGCACTGGCTCGATGACATAACGCCCTCATTAAACCGCTGTCCGATTCCCTATTCCCGATT
CTCCATTCCCGAGTCTCACC

Downstream 100 bases:

>100_bases
CGATCCGGGATCGGCACAGGCTGCTGCCGGGCAGTTGCAAGCCCGGCCGCTGTCGCCAATCCCGAATCCCGAATCTCTAA
TCCCGGCTACTGAGCCAGCT

Product: carbon-nitrogen hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLAGQTDLVILPETFTSGFSNDAIDKAEGMDGPTVAWVRAQAARLGAAVT
GSVQLRTDAGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQMDFDLQVFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
ISATALAEHRARFPAMLDADRFEIGD

Sequences:

>Translated_266_residues
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLAGQTDLVILPETFTSGFSNDAIDKAEGMDGPTVAWVRAQAARLGAAVT
GSVQLRTDAGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQMDFDLQVFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
ISATALAEHRARFPAMLDADRFEIGD
>Mature_266_residues
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLAGQTDLVILPETFTSGFSNDAIDKAEGMDGPTVAWVRAQAARLGAAVT
GSVQLRTDAGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQMDFDLQVFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
ISATALAEHRARFPAMLDADRFEIGD

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=269, Percent_Identity=44.9814126394052, Blast_Score=224, Evalue=6e-60,
Organism=Drosophila melanogaster, GI17933642, Length=240, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30073; Mature: 30073

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLAGQTDLVILPETFTSGFSNDAIDKAEGM
CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHCCCCCCCCCHHHCCC
DGPTVAWVRAQAARLGAAVTGSVQLRTDAGVFNRLLWATPDGALQYYDKRHLFRFGNEHL
CCCEEHHHHHHHHHCCEEEECCEEEEECCHHHHHHEEECCCHHHHHHHHHHHHHHCCHHH
RYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQMDFDLQVFVANWPSARA
EEECCCCEEEEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
YAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCHHHHHCCEEEEEE
ISATALAEHRARFPAMLDADRFEIGD
HHHHHHHHHHHCCCCEECCCCEECCC
>Mature Secondary Structure
MHDLRISLIQGDTRWHDPAGNRDYYAALLEPLAGQTDLVILPETFTSGFSNDAIDKAEGM
CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHCCCCCCCCCHHHCCC
DGPTVAWVRAQAARLGAAVTGSVQLRTDAGVFNRLLWATPDGALQYYDKRHLFRFGNEHL
CCCEEHHHHHHHHHCCEEEECCEEEEECCHHHHHHEEECCCHHHHHHHHHHHHHHCCHHH
RYAAGRERLTVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQMDFDLQVFVANWPSARA
EEECCCCEEEEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHH
YAWKTLLRARAIENLCFVAAVNRIGIDGNQLHYAGDSAVIDFLGQPQVEIREREQVVTTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCHHHHHCCEEEEEE
ISATALAEHRARFPAMLDADRFEIGD
HHHHHHHHHHHCCCCEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]