| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048065
Identifier: 78048065
GI number: 78048065
Start: 2831526
End: 2833145
Strand: Reverse
Name: 78048065
Synonym: XCV2509
Alternate gene names: NA
Gene position: 2833145-2831526 (Counterclockwise)
Preceding gene: 78048066
Following gene: 78048064
Centisome position: 54.71
GC content: 63.09
Gene sequence:
>1620_bases ATGGACAGGGGCAACACGTCGCGATGGTTGACGATTCCACTCTTGCTGGGCGCGCTGGTCTTGGCGTCGTGCAAGCAAGC CGAGGAACCCAAGGTGGCCGAAAAGAAGGCACCGGTCAAAGTCATCCTGGTTGAGGCGCAACTGCCGCCCAAACCGGTCA AGCCGCCGCTGCCGCCGCTGTTTTCGGACATCGAACGCCGCACATTCCAGTTCTTTTGGGACACCACCAACGAGGTCAAC GGCCTGTCGCCGGATCGGTTTCCGTCGCGCCCGTTTGCCAGCATTGCGTCGGTCGGATTCGCGTTGACCGCCTATCCGAT CGGCATCGAGAACGGGTGGGTCAGTCGCAATCAGGCGATCGACCGCACCCTGACCACGCTGAAATTCTTCCGCGACGCAC CGATGGGTCCGCAGAAGACCGGCCGGGCCGGCTACAAGGGCTTCTACTACCATTTTCTGGACATGCAGCAGGGCAACCGC TACGACAGCTGGGTTGAACTGTCGAGCGTGGACACCGCACTGCTGATGATGGGCGTGTTGTTCACCCAGTCGTACTACGA CGGCGACGACCCGCGCGAAAAGGAGATCCGCCAGATCGCCGACACGCTGTACAAGCGCGTGGACTGGCGCTGGTTGCAAC AGCGCGCGCCGCTGATCTCGATGGGCTGGTTCCCCGAGAGCGGCTTCATCAACCACGACTGGATGGGCTACAACGAGGCG ATGATGCTATACATCCTCGCGCTGGGCTCGCCAACGCATGGCGTCGACCCGGACGCCTGGACCAGCTGGACCCGCACCTA CAACAACGACTGGGGCGTGTATCAGGGCCAGGAATACCTGTCGTTCGGCCCGCTGTTCGGCCACCAATACAGCCATGTCT GGATCGACTTCCGCGATATCCAGGACCAGTACATGCGCGAACGCGGCATCGACTACTTCCTCAACAGCCGCCGCGCCACG TTGGCGCAGCGCGACTACGCCATCGACAACCCGATGAAGTGGAAGGACTACGGCGAAAACGTCTGGGGCTTGACCGCCAG CGACGGCCCGCAGAACACCAGCCAGGAATACCGCGGCGAGCAGCGCCAGTTCCGCCATTACTCTTCGCGCGGCGCCGGTC TGCGCGAGAATTTCGACGACGGCACCATCGCCCCGACTGCGGCGATCTCCTCGATCGTGTTCGCCCCGGAAGTGGTGATT CCTGCCACCCAAGAGATGCACAAGCGCTATGGCGACTTCCTGTATTCGAGCTACGGGTTCCTGGATTCGTTCAACCCCAG TTTCAACTACGACATCCCGATCAAGACCGGGCGCATGGTGCCGGACCGTGGCTGGGTGGCCAGCGACTACATCGCCATCG ACCAGGGCCCGATCCTGACGATGATCGCCAACTACCAGAACGAATTCGTCTGGAACGTGATGAAGAAGAACCCCTACATC CGTGCCGGTCTGGAACGCGCCGGCTTCACCGGCGGCTGGCTCACTCCGGAGGGCGAGCCGCAGCCGGCGCCGCAGAAGGA CGAGCAGAAGGCCGCCGCGCGCGCGCTGGGCATGGCCGAATCGCGTGCCGCCGCCGCCCAGGCCCAGCAAGACCCCTCGC AACGCCAGAAACCCGAGTAA
Upstream 100 bases:
>100_bases GCTCGACCGCCCTGGCCGCAACGCCAGGGCGGTCGAACTCGGCGCCTGGATAGGGTAGGTTGGCGTGTCAGATGTAATCG ATTACACACGTGGGGGGCGG
Downstream 100 bases:
>100_bases TCCGTGCGCCTTTTGAAACTGTTGATGTTGGCCGTCGCCCTGTGTGCAGGTGCGACGGGATGCGAACGCTCCGATCCGGG CAAGACCACGGTGCGCTTCT
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MDRGNTSRWLTIPLLLGALVLASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPLFSDIERRTFQFFWDTTNEVN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVI PATQEMHKRYGDFLYSSYGFLDSFNPSFNYDIPIKTGRMVPDRGWVASDYIAIDQGPILTMIANYQNEFVWNVMKKNPYI RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE
Sequences:
>Translated_539_residues MDRGNTSRWLTIPLLLGALVLASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPLFSDIERRTFQFFWDTTNEVN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVI PATQEMHKRYGDFLYSSYGFLDSFNPSFNYDIPIKTGRMVPDRGWVASDYIAIDQGPILTMIANYQNEFVWNVMKKNPYI RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE >Mature_539_residues MDRGNTSRWLTIPLLLGALVLASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPLFSDIERRTFQFFWDTTNEVN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVI PATQEMHKRYGDFLYSSYGFLDSFNPSFNYDIPIKTGRMVPDRGWVASDYIAIDQGPILTMIANYQNEFVWNVMKKNPYI RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61532; Mature: 61532
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRGNTSRWLTIPLLLGALVLASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPL CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCHH FSDIERRTFQFFWDTTNEVNGLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAI HHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHH DRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVL HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHH FTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHH MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDI HHHHHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEEEEHHHH QDQYMRERGIDYFLNSRRATLAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGE HHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHCCH QRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVIPATQEMHKRYGDFLYSSYGF HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCC LDSFNPSFNYDIPIKTGRMVPDRGWVASDYIAIDQGPILTMIANYQNEFVWNVMKKNPYI CCCCCCCCCEEECCCCCCCCCCCCCEECCEEEECCCCEEEEEHHCCHHHHHHHHHCCCCE RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE EECHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure MDRGNTSRWLTIPLLLGALVLASCKQAEEPKVAEKKAPVKVILVEAQLPPKPVKPPLPPL CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCHH FSDIERRTFQFFWDTTNEVNGLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAI HHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHH DRTLTTLKFFRDAPMGPQKTGRAGYKGFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVL HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHH FTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFINHDWMGYNEA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHH MMLYILALGSPTHGVDPDAWTSWTRTYNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDI HHHHHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEEEEHHHH QDQYMRERGIDYFLNSRRATLAQRDYAIDNPMKWKDYGENVWGLTASDGPQNTSQEYRGE HHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHCCH QRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVIPATQEMHKRYGDFLYSSYGF HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCC LDSFNPSFNYDIPIKTGRMVPDRGWVASDYIAIDQGPILTMIANYQNEFVWNVMKKNPYI CCCCCCCCCEEECCCCCCCCCCCCCEECCEEEECCCCEEEEEHHCCHHHHHHHHHCCCCE RAGLERAGFTGGWLTPEGEPQPAPQKDEQKAAARALGMAESRAAAAQAQQDPSQRQKPE EECHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA