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The map label for this gene is repA [H]

Identifier: 78048037

GI number: 78048037

Start: 2799822

End: 2800697

Strand: Reverse

Name: repA [H]

Synonym: XCV2481

Alternate gene names: 78048037

Gene position: 2800697-2799822 (Counterclockwise)

Preceding gene: 78048040

Following gene: 78048036

Centisome position: 54.08

GC content: 67.47

Gene sequence:

>876_bases
GTGGCGATTGACGTGCTGGCGGCGTTCGAGTGCGAACCGCCGGCGCTGGACTTCATATGGCCGGGCTTCCTCGCGGGAAC
CGTCGGCGCGCTCGTCGCCCCAGGGGCCACGGGTAAGAGCTTCTGGGCGCTGGAAGCGGCCATGAGCATCGCATGCAGCG
TTGCCGGCGGCGACCTCGTGGGCCTGGCCCCCGCGCACACCGGGCGAGTGGTCTATCTGGCCGGGGAAGACCCGCCGCCC
GCGCTTGTGCGGCGCATTCACGCCATCGGTCAGCACCTCGGACACGCGGCACGCCAAGCCATCGCAGAGAACCTTGCGCT
TGAACCGATCATGGGCAAGCGACTGAATGTCATGGACGAGGCTCACTTGCGCCGCGTCATCGAGTACAGCGCTGGGGCGA
GGCTGATCGTGCTGGACACCCTGAGCCGCATCCACGCCCTCGATGAGAACAGCAACGGCAACATGGCCCACCTCGTGGCC
GTGCTGGAGCAGGTTGCGGCTACCACGGGCGCATCCGTGCTCTACCTGCACCACGTCAGCAAGGGAAGTGCCCGCGAAGG
GCTGACCGACCAGCAGCAGGCCGCGCGTGGCGCGTCCGCGCTGATCGACAACGCCAGGTGGTGCGGTTACGTCGCCCGCA
TGACTGAGGACGAGGCGAAGCGCCTCAGCGACCGCGCCCATGACCGGCAGCCCATCGGCGATGAGCGGCGCGGCTACTTC
GTGCGTTTCGGCGTCAGCAAGCAGAACTACGACGCCACGCCGCTTGATCGCTGGTACATGCGGCACGCCGGCGGCGTGCT
GGTGCCGGTGGAGCTGTATGAGGCCAGCAGGAATGAGGAAAGACGTGATGGTCGGAGGCGAGGCGATGGCTTTTGA

Upstream 100 bases:

>100_bases
CAAGGCCCGCTTGAAGATCGGCCGGCGGGTCTACTTCCGAACCTCGCAGATCGCCGAGGTGCTGAGCGACGAATCCCTGT
ACGGAACGGGGAGCTGAGTC

Downstream 100 bases:

>100_bases
CCTTACCCATGCCAGGCACGATCCAATGCACTGCTTGGTCCCCGGTTTGTTCCGCAGTCTCAAGCGCGGCGAACGGAAGA
AGCTCAAGCTCGACGTGACG

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSIACSVAGGDLVGLAPAHTGRVVYLAGEDPPP
ALVRRIHAIGQHLGHAARQAIAENLALEPIMGKRLNVMDEAHLRRVIEYSAGARLIVLDTLSRIHALDENSNGNMAHLVA
VLEQVAATTGASVLYLHHVSKGSAREGLTDQQQAARGASALIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYF
VRFGVSKQNYDATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF

Sequences:

>Translated_291_residues
MAIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSIACSVAGGDLVGLAPAHTGRVVYLAGEDPPP
ALVRRIHAIGQHLGHAARQAIAENLALEPIMGKRLNVMDEAHLRRVIEYSAGARLIVLDTLSRIHALDENSNGNMAHLVA
VLEQVAATTGASVLYLHHVSKGSAREGLTDQQQAARGASALIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYF
VRFGVSKQNYDATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF
>Mature_290_residues
AIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSIACSVAGGDLVGLAPAHTGRVVYLAGEDPPPA
LVRRIHAIGQHLGHAARQAIAENLALEPIMGKRLNVMDEAHLRRVIEYSAGARLIVLDTLSRIHALDENSNGNMAHLVAV
LEQVAATTGASVLYLHHVSKGSAREGLTDQQQAARGASALIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYFV
RFGVSKQNYDATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF

Specific function: This protein is involved in regulating the plasmid copy- number. Increasing the level of this protein results in a higher plasmid copy-number [H]

COG id: COG3598

COG function: function code L; RecA-family ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31551; Mature: 31420

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSIACSVAGGDLV
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE
GLAPAHTGRVVYLAGEDPPPALVRRIHAIGQHLGHAARQAIAENLALEPIMGKRLNVMDE
EECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHH
AHLRRVIEYSAGARLIVLDTLSRIHALDENSNGNMAHLVAVLEQVAATTGASVLYLHHVS
HHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
KGSAREGLTDQQQAARGASALIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYF
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCEE
VRFGVSKQNYDATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF
EEEECCCCCCCCCCHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSIACSVAGGDLV
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE
GLAPAHTGRVVYLAGEDPPPALVRRIHAIGQHLGHAARQAIAENLALEPIMGKRLNVMDE
EECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHH
AHLRRVIEYSAGARLIVLDTLSRIHALDENSNGNMAHLVAVLEQVAATTGASVLYLHHVS
HHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
KGSAREGLTDQQQAARGASALIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYF
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCEE
VRFGVSKQNYDATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF
EEEECCCCCCCCCCHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2653965 [H]